Strain | Pseudomonas veronii strain R4 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACCAACCTGAATCTCGAAGACATGGTGCGCGACGGCCGCTTCCGCGAAGACTTGCTGTACCGCCTCAACGTCATCACCTTGCACCTGCCGCCGTTGCGC GAACGCAGCGAAGACATCCTGGCCTTGGCCGACCGCTTCCTCGCCCGCTTCGTCAAGGAATACGCCCGACCGGCGCGGGGCTTCAGCGATGAGGCACGCG AAGCGCTGCTCAACTACCGCTGGCCGGGCAATATCCGTGAGCTGCGCAACGTGGTCGAGCGCGCGAGCATTATCTGCCCGCAGGAAAAAGTCGAAATCAG CCACCTCGGGATGGCCGAACAGCCGACCAACAATGCCCCCCGTATCGGTGCAGCGTTGAGCCTGGACGAGCTGGAAAAAGCGCATATCGGCGCGGTACTT GCCACCAGCGACACCCTGGATCAGGCGGCCCGCACCCTGGGCATCGACGCGTCGACGCTGTACCGCAAACGCAAACAGTACAACCTGTGAGCGGCACCCT
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DNA Sequence for Gene |
>SU91_RS00145
ATGAAGTTAGCGATGACATTGCGCACTCGGTTATTCCTGAGTATCTCAGCGCTGATCACCGTCGCCCTGCTGGGGTTGATCCTGGGCCTGGTCAGCGTGA TGCAGATGGCCAAGACCCAGGAGTCGTCGATCCGCAGCAACTTCATCACCCTCGACCTGGGACTCAAACTGCGCCAGAGCCTGGGCGATCAGTTGATGAT GATGCTCGAACAGCGCCCCAATCCCGAGGCGCTGCAAGCGTCCGAACAGCGTTACTTCGAGCTGCTCGACCAAGGCATTGCGCATGAACAGCGCGACGGG AACAGCGGCGGTTTCAGCCGGGCCCGGGCCGACTATCAGCGCTTCCTGGCGGCTTTTGACGAGTCTCAACAAGCGTCCCCACCGCCCGGCAGCAAAGAGA AAATCACCGAAACCTTCAATGTCCTGCGCAACGGCCTGATCGCCGAGCACAAGCAGGCCTTGGAAAACATCAGCGCCAGCGAACATAAATCCCGCGAGCG CGCCTTGTTGATCGCCGGGCTGCTGGGGTTGGTTGGCCTCGCAGTGTTGATCATCGGTTTTGTTACCGCCCATGGCATCGCCCGACGGTTTGGCGGGCCG ATCGAAGCACTGGCCAAGGCCGCCGACAAGATCGGGCAAGGCGATTTCGAAGTGACCCTGCCTATTTCTTCGGCAGCGGAAATGAACCAGCTGACCCGAC GCTTCGGCATCATGGCCGAAGCCTTGCGCCAGCATCAGGCAACCAATATCGATGAGTTGCTCGCCGGCCAGCAGCGCCTGCAGGCGGTACTCGACAGTAT CGACGACGGCCTGTTGATGATTGACCGGCAAGGCCGCCTGGAGCACCTCAACCCAGTGGCACAGCGCCAGTTGGGCTGGGACGAGGAACGTCTCGGCCAG GGCCTGGGCGAGGCGCTGGGTCGCCCGGAAATGGACGATCAGCTGCAACTGGTGCTGCGTGGCGGCAGCCTGGAGCGCGCGCCGGATGACCTGGAAGTGG AAGTCGAGGGCGAACTGCGCCTGCTGACCTACAGCCTGACGCCGGTGAGCCACACCCAGGGGCATATCCTCGGTGCCGTGATGGTGCTGCATGACGTCAC CGAACAGCGCGCCTTTGAACGGGTACGCAGCGAGTTCGTGTTGCGCGCCTCCCACGAACTGCGCACGCCGGTGACCGGTATGCACATGGCCTTCGGCTTG TTCCGCGAACGCGCGAAGTTTCCTGCGGAGTCCCGTGAAGCGGACCTGCTGGATACGGTCAATGAAGAAATGCAGCGCCTGATGCAACTGATCAACGACT TGCTCAACTTTTCGCGCTACCAGAACGGCCTGCAGAAACTCACCCTGGCCCCGTGCGATGTCACCGACCTGCTGGAGCATGCACGGGCGCGCTTTGCCGA GCCGGCGAATGCACAACACATCGAACTGCTGGTAGAAGCCCAGCCCGACCTGCCTCGGCTGTATGCCGACCAGGCGCAACTGGAACGCGTGCTCGACAAC CTGTTGGGCAACGCCCTGCGCCATACCGCCGAGGGCGGGCAGATCCGTCTGCAGGCACGGCGCCATGGCGAGCGGGTGATCATCAGCGTCGAGGACAACG GCGAAGGTATCGCCTATGGCCAACAAGGGCGCATCTTCGAACCCTTCGTGCAGGTGGGCCGCAAGAAAGGCGGCGCCGGCCTGGGGCTGGCGCTGTGCAA GGAGATCGTGCAACTGCACGGCGGCCGCATGGGCGTGTATTCGCGGCCGGGGCAGGGCACGCAGTTCTACATGGCGTTGCCGCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGATTAACGCCGGTCGAGGGCACGCAGGATCGCGGCACTCTCGGCGTCCGGCGTGCCATCGAACAGCGCAGGGCGAAAGTGCATCTGGAACGCGGCGAGC ACATGGCGCGTGGCGACGTCCAGCTCACCGGTCTGCGGCGTCTGGTAGCCCAGGTGCGCCAACGCTTCCTGGAACCAGGTGATGCTCGGCAGGTCCGTGG CGTACTGCGCCTGGAAGCGTGCCACCGCCTGCGCGTCGGGCCAGATGCCCAGGCCTTTCTCGGCCAGGCGCTTCCATGGGAACAACGGCCCCGGGTCCAG CTTGCGCAGCGGCGCGATGTCGCTGTGACCGATGATGTTTCGGGGGTCGATGCCGTTGCGCGTGCTGATGTCCTTGAGCAACACCTCCAGGGATTTCACC TGCGCTTCGGAATACGGGTACCACACGCGGCCCGTCGGCGTGTCGCGGAACCCCGGGTTGACGATCTCGATCCCGATGGAGCTGGAGTTCAGCCAGGTGC
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Amino Acid Sequence |
>histidine kinase
MKLAMTLRTRLFLSISALITVALLGLILGLVSVMQMAKTQESSIRSNFITLDLGLKLRQSLGDQLMMMLEQRPNPEALQASEQRYFELLDQGIAHEQRDG NSGGFSRARADYQRFLAAFDESQQASPPPGSKEKITETFNVLRNGLIAEHKQALENISASEHKSRERALLIAGLLGLVGLAVLIIGFVTAHGIARRFGGP IEALAKAADKIGQGDFEVTLPISSAAEMNQLTRRFGIMAEALRQHQATNIDELLAGQQRLQAVLDSIDDGLLMIDRQGRLEHLNPVAQRQLGWDEERLGQ GLGEALGRPEMDDQLQLVLRGGSLERAPDDLEVEVEGELRLLTYSLTPVSHTQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL FRERAKFPAESREADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLAPCDVTDLLEHARARFAEPANAQHIELLVEAQPDLPRLYADQAQLERVLDN LLGNALRHTAEGGQIRLQARRHGERVIISVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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