Pseudomonas tuomuerensis JCM 14085, PT85_RS15805

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	318	433	3.0E-8
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	426	601	6.8E-66
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	323	435	5.52E-13
Gene3D	G3DSA:3.30.450.350	CHASE domain	IPR042240	CHASE domain superfamily	122	229	6.9E-9
PANTHER	PTHR45138	REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM	-	-	60	602	2.2E-73
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	295	424	1.2E-12
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	438	597	2.5E-50
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	433	600	2.0E-50
CDD	cd00130	PAS	IPR000014	PAS domain	321	422	0.00243298
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	442	602	4.71E-48
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	432	602	3.8E-52
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	425	603	2.5E-58
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	438	599	4.53974E-62
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	117	145	-
SMART	SM01079	CHASE_2	IPR006189	CHASE domain	75	210	3.8E-4

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.