Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGTACAGCGAAGATGCACAAACCGCCGTGGCGGCGCAGAGCGAGGTCATCGCACGTTATGTGCGCGCCTACCCGGACCAGTACATGTGGACCATGAAGC GCTTCAAGCAACGCCCCGAGGGTGAGGCGAAGTGGTATTGACTGCTGTCAGCGGCGACCGCCGTCGCCATTCGCGTACGCCGCTCTACTGGCATATCCGC GTCTGGCACGAGAGCTTCGGTGAAAAGGACGCCCATACCCGTGACGTGTCCGCCGTGGGTGTCTATGTGGAGCTGCACGAGCTGGTCAGGCTGCCGGTGG GTACGCGCCTGAAGGCGCAGATCCAGGGACTGCCATCCCCCGCTCCGGTGCTGGAGATGGAGATTCAGCGTACCGACGAGCGCGGCGCCGGTCTGCTGTT CATCCTCGATGACGCGCGCGGCTGAAAGCCGCTAGAATGCCGCCCGCCCCAAGCGGGCTTCATGGGTTCCCTCACCCCAGGTCAAAAAAAGGATCATCCG
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DNA Sequence for Gene |
>PT85_RS14710
ATGCCGTTGCCTACCCTGGCGGTCCAGCGTGCGCTGGCCGTGCTTATCGCGTTTCACATCCTCATCATCATCGCCAGCAACTACCTGGTGCAGATCCCGG TCAGCCTGTTCGGCTGGCACACCACCTGGGGCGCCTTCAGTTTCCCGTTCATCTTCCTGGCCACCGACCTCACCGTGCGTCTGCTCGGCAAGCAGGTTGC GCGGCGGGTGATTGCCCGGGTCATGCTGCCGGCGCTGCTGGTCTCCTATGGGGTCTCGGTGCTGTTCCAGGAAGGCACCTACCGCGGCGTCGCGGCCTTG CTGGAGTTCAACGACTTCGTGCTGCGCATCTCGTTGGCCAGCTTCGCCGCCTATGTGGTCGGCCAGTGGCTGGACATCCAGGTGTTCGACCGCCTGCGTC GTCTGCGCCAGTGGTGGGTGGCGCCCGCCGCCTCGACCACGCTGGGCACGCTGGTGGACACCTTCGTGTTCTTTTCGGTGGCCTTCTGGAACAGCAGCAA TGCATTCATGGCGGCCAACTGGGTGGAGATCGCCGCAGTGGACTATGTGATCAAGCTGGCCATCAGCCTGGCGCTGTTCGTGCCGCTCTACGGCATGCTG CTCAACGCGCTGATGCGACTGCTGCCGGGGCGCCCGGCCACGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCTGGTGGTGGCCAACGCTGTGCGTTGCCCACCCTACGGTGCGTCTCCGTGTAGGGCGGTCGGCGCTGTTTACGAGCGCGCCGGCTTGTCCAGCTTCT TCAGGAACACCGTCATCTCCTTCTCGGCCTGCTTGTCGCCGTGACCCTGCGCCGCCTGCAGGCCCTGTTGCCAGGCCTGGCGCGCGCCGTCGAGGTCGCC GCTGGCCTGCAGCGCCTTGCCCAGCAGCTTCCAGGCGGCGGAATACTTGGGGTCCTGCGCCACGCAGCGGCGCAGATGCTCGGCGGCCCTGGCCGGATCG CCGGCATCCAGATAGCCCTTGCCGAGCCCGAAGCGCAGCAGCGGGTTGTCGATTCCCTTGGCGAGCATGTTTTCCAGCGATGCGAGCATGACGGCGGTCT CCGTGCGGACCCGCTCACCTTAAAAGAATGCCAACCCCACTTGGAAGAGCCGTTCCACATCGCGGATATGGCGTTTGTCCATCAGGAACAGGATCACGTG
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Amino Acid Sequence |
>hypothetical protein
MPLPTLAVQRALAVLIAFHILIIIASNYLVQIPVSLFGWHTTWGAFSFPFIFLATDLTVRLLGKQVARRVIARVMLPALLVSYGVSVLFQEGTYRGVAAL LEFNDFVLRISLASFAAYVVGQWLDIQVFDRLRRLRQWWVAPAASTTLGTLVDTFVFFSVAFWNSSNAFMAANWVEIAAVDYVIKLAISLALFVPLYGML LNALMRLLPGRPATV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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