Pseudomonas tuomuerensis JCM 14085, PT85_RS14670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0019825 oxygen binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF11563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF11563 Protoglobin IPR044398 Globin-sensor domain 19 155 2.7E-12
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 294 448 2.6E-45
CDD cd14757 GS_EcDosC-like_GGDEF IPR039435 Diguanylate cyclase DosC, globin sensor domain 4 151 3.92984E-50
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 12 451 3.6E-62
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 289 452 2.4E-54
Gene3D G3DSA:1.10.490.10 Globins IPR012292 Globin/Protoglobin 1 151 6.9E-35
SMART SM00267 duf1_3 IPR000160 GGDEF domain 280 452 1.7E-58
SUPERFAMILY SSF46458 Globin-like IPR009050 Globin-like superfamily 19 149 7.48E-18
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 297 451 3.92E-48
CDD cd01949 GGDEF IPR000160 GGDEF domain 294 450 1.0542E-60
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 286 452 6.1E-49
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 292 451 3.3E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.