Pseudomonas tuomuerensis JCM 14085, PT85_RS14655 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_6, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGAAACCGGTTTTCGAGAACACGCTGGCCCAGCTGCTGGACCTTCCCGGGCTGTCCCTCAGCTACTACCGAGGGTGGGACAAGGATCGCGAGCTGGAGG AAGTGCTGGAGAGCAGCCTGCAGCGAGACATGTCGCTCGGCCACACCCAGGCAGGTCCTCAGCGCGCCGATCTGCGTTTGCGCCTGGAGGGCCACAATGC GGCAGACATTCTATCCCGCGGTCAGCAGAAGCTGGTGGTGTGCGCCTTGCGCATAGCCCAGGGGCATCTGCTCAATCAGGCCAAACAGGGTCGTTGCCTC TATCTGGTAGACGACCTGCCCTCGGAGCTGGACGAGCGTCACCGGATGGCGTTGTGTCGCCTCCTTGAAGAGTTGCAGTGCCAGGTATTCATCACCTGCG TCGAACCCCACGTATTGAAGGATGGCTGGCGCACGGATACGCCGGTTGCCATGTTCCACGTGGAACATGGTCGAATCACCCAAGACTATCGGAGTGAAGC
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| DNA Sequence for Gene |
>PT85_RS14655
|gyrB
ATGAGCGAACAAAACACCTACGACTCCTCCAGTATCAAGGTGCTGAAGGGATTGGATGCAGTGCGCAAACGCCCCGGTATGTACATCGGCGATACCGACG ATGGCACCGGTCTGCACCATATGGTGTTCGAGGTGGTGGACAACTCCATCGATGAAGCCCTGGCCGGCTACTGCTCCGAAATCACCATTACCATTCATAC CGACGAATCGATCACCGTCCGCGACAACGGGCGGGGCATTCCTGTGGATATCCACAAGGAAGAAGGCGTTTCGGCTGCCGAGGTCATCATGACCGTGCTG CATGCTGGCGGTAAGTTTGATGACAACAGCTACAAGGTCTCGGGCGGTCTCCATGGCGTGGGCGTCTCGGTGGTCAATGCGCTCTCCGAAGAGCTGGTGA TGACCATTCGGCGTGCCGGAAAAGTGTGGGAGCAGACCTACGTGCATGGCGTGCCGCAGGCGCCTCTGGCCGCAGTGGGCGAAACCGAGGGCACTGGCAC GCAGATCCACTTCAAGCCGTCCGCGCAGACCTTCCGCAATATCCATTTCAGTTGGGACATCCTGGCCAAACGCCTGCGCGAGCTGTCGTTCCTCAACTCC GGCGTCGGCATCGTGCTGCGCGACGAACGCAGCGGCAAGGAAGAACTCTTCAAATACGAAGGCGGCTTGAAGGCCTTCGTCGAATACCTGAACACCAACA AGACCGCAGTCAACAGCGTGTTCCACTTCACCGTGCAGCGCGAAGAGGACGGTGTGGGCGTAGAAGTGGCCCTGCAGTGGAACGACGGCTTCAATGAAAA CATCCTGTGCTTCACCAACAACATTCCGCAGCGTGATGGCGGCACCCACCTGGCGGGCTTCCGCTCGGCGCTGACACGCAATCTGAACAACTACATCGAG GCCGAGGGCCTGGCCAAGAAGTTCAAGATTTCCACCACTGGCGACGATGCCCGTGAAGGCCTGACCGCGATCATCTCGGTGAAGGTGCCGGATCCCAAGT TCAGCTCGCAGACCAAGGACAAGTTGGTGTCCTCGGAAGTGAAGACTGCGGTGGAACAGGAAATGGGCAAGTTCTTCGCTGACTTCCTGCTGGAGAACCC CAACGACGCCAAGGCGGTGGTCGGCAAGATGATCGATGCCGCACGGGCTCGCGAGGCCGCGCGCAAGGCCCGGGAAATGACCCGTCGCAAGGGCGCCCTG GACATCGCCGGCCTGCCGGGCAAGCTGGCTGACTGCCAGGAAAAGGACCCCGCGCTGTCCGAGCTCTACCTGGTGGAGGGTGACTCCGCCGGCGGTTCCG CCAAGCAGGGCCGCAACCGGCGCACCCAGGCGATCCTGCCGCTCAAGGGCAAGATCCTCAATGTGGAGAAGGCGCGCTTCGACAAGATGCTTTCCTCCCA GGAAGTGGGCACCCTGATCACCGCGTTGGGCTGCGGCATCGGCCGCGACGAGTACAACATCGACAAGCTGCGTTACCACAACATCATCATCATGACCGAC GCCGACGTCGACGGCGCCCACATCCGTACCCTGCTGCTGACCTTCTTCTTCCGGCAGCTGCCGGAGCTGATCGAGCGTGGTTACGTCTACATCGCCCAGC CGCCGCTGTACAAGGTCAAGAAGGGCAAGCAGGAGCAGTACATCAAGGACGACGAGGCCATGGAGGAGTACATGACCCAGACCGCCCTTGAGGATGCCAG CCTGCACGTCAACGAGAACGCGCCGGGCATTTCCGGCCTGGCCCTCGAAGCCTTGGTCAACGATTACCGCGCGGTGATGAAGACCCTCAAGCGCCTGTCG CGCCTGTATCCGCAGGAGCTCACTGAACACTTCATGTACCTGCCGGCCATCGGCCTGGAGCAGTTCGCCAGCGAAAGCGCCATGCAGGGCTGGTTGGATG GGCTGCGTGAGCGCCTGAAGGCCGAGGAACGCTCGGGCCAGGCCACCTACCAGCTGCAGCTGCGCGAGGACCGCGAGCGCGGTTTCTGGCTGCCGGAGGT GGAGATCAAGTCCCACGGCCTGTCGCACTACATCACCTTCAACCGCGACTTCTTTGCCAGCAACGACTACAAGAGCGTCGTGGCATTGGGCGAGAAGCTG GGCAACCTGCTCGAGGAAGGCGCGTATGTGAAGCGTGGCGAGCGGCGCAAGGCGGTTAGCACCTTCAAGGAAGGCATGGACTGGCTGATGGCGGAAACCA GCAAGCGCTACAGCGTGCAGCGCTACAAGGGCCTGGGCGAAATGAACCCGGATCAGCTGTGGGAAACCACCATGGACCCGGCCGCCCGGCGCATGCTCAA GGTGACCATCGAGGACGCCATTGCCGCCGACCAGATCTTCAATACCCTGATGGGCGACGCCGTGGAGCCGCGCCGCGACTTCATCGAGGCCAATGCCCTG GCGGTGTCGAATCTGGACGTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCTGCAGACGATGAAAAAAACCCGGCCTGCGCCGGGTTTTTTTTTGCCGCGAAAGAGCCCTAGCCCATCCAGCCAAGGGTGAGGCCGGTGAGCATCAG GTAGCGCGCACCCTTGGCGACCAGGACCAGTAACAGGAAGCTCCACCAAGGCTCACGCATCACGCCGGCAATGACCGTCAGCGGATCGCCGATGATTGGG AGCCAGCTCAGCAGCAGGCTCCAGCGGCCGTAGCGTTGATAGCGCTGGCGGGCCTGTTCCAACTGCTGGGGGCTGACAGGGAACCAGCGTTTGTGCTGCC AGTGTTGCAGAGAACGACCCAGCAGCGCATTCAGGCAGGAGCCCAGCACGTTGCCGGCGGTTGCGATCCCCAGCAAGGCGACGATTGAATACTGCCCGCT CAGCAGCAGTGCCACCAGCAGGGCTTCGGATTGCAGGGGCAGCAGGGTTGCCGCTCCGAGGGCCGCAAGAAATAACCCGCTGTAGGCGCCGGCTTCGATC
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEQNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSEITITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELVMTIRRAGKVWEQTYVHGVPQAPLAAVGETEGTGTQIHFKPSAQTFRNIHFSWDILAKRLRELSFLNS GVGIVLRDERSGKEELFKYEGGLKAFVEYLNTNKTAVNSVFHFTVQREEDGVGVEVALQWNDGFNENILCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE AEGLAKKFKISTTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKFFADFLLENPNDAKAVVGKMIDAARAREAARKAREMTRRKGAL DIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGRDEYNIDKLRYHNIIIMTD ADVDGAHIRTLLLTFFFRQLPELIERGYVYIAQPPLYKVKKGKQEQYIKDDEAMEEYMTQTALEDASLHVNENAPGISGLALEALVNDYRAVMKTLKRLS RLYPQELTEHFMYLPAIGLEQFASESAMQGWLDGLRERLKAEERSGQATYQLQLREDRERGFWLPEVEIKSHGLSHYITFNRDFFASNDYKSVVALGEKL GNLLEEGAYVKRGERRKAVSTFKEGMDWLMAETSKRYSVQRYKGLGEMNPDQLWETTMDPAARRMLKVTIEDAIAADQIFNTLMGDAVEPRRDFIEANAL AVSNLDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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