Pseudomonas tuomuerensis JCM 14085, PT85_RS14445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas tuomuerensis strain JCM 14085 PT85_6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGACGCCTGGCGGCATCCGCTGAGCGGGGCAAAGCCGAGGAGCTGCCCCCGCGCACCCTCCAGCTGATCCTCGCCGACGGCAGTCTGTACGACCACCTG GGGACGCCCACCAAGGTCGATCGCAACATCGATCCCACCACCGGCTCGCTGACCATCGAGGCCGAGTTTCCCAATCCCCAGAACCTGCTGCGCCCGGGGA TGTTTGCACGCATCCGCTTCGATGCCGACGCGATCAAGGGCGCCATCCTGGTGCCGCAGCGGGCGATCAGCGAGCTGCAGTCCGTCCACCGTGTGTTCGT CATCAAGGCGGACGATACCGTCGAGGTGCGTCAGGTGCGGGTAGGGCCGCGGCTGGGCAGCGACTGGGTGATCGAGTCCGGCCTGCAGGCGGGCGAGCGG GTCGCGGTGGAGGGCTTGTTGCGGCTGCGCCCCGGCATGACCGTGCGCCCACGCCCGGCCGAGAGTGGGGATCTGCCGCCGGTGGCGGAGGGTGGCCGGA
DNA Sequence for Gene
>PT85_RS14445
ATGGGTGAGTTCTTCGTCCGCCGCCCGGTGTTCGCGATGGTGATCTCGATCCTCATCCTGATCATCGGCCTGGTGGCCATGGGGCGCCTGCCCATTGCCC AGTACCCGGACATCACGCCGCCGGAAATCAAGGTCGAAGCCACCTACGACGGCGCCAACGCGGTGAACGTCGAGCAGTCGGTGGCCACGCCCCTGGAGCA GAAGGTCAACGGCGTGGAAAACATGCTGTACATGAAATCCACCAACGCGGGTAACGGACAGATGACCCTGTCGGTGGCCTTCGAGGTGGGTTCGGACCAG GACATCTCCAACGTGCTGGTGCAGAACCGCGTTTCGGAAGGCGCCGCGCAGTTGCCCGAGGAAGTCAAACGACGCGGGGTGAAGATCAAGAAGGCGCTGG CCTTCCCGCTGATGCTGGTGACCCTGCGTTCGCCCAATGGCAGCTACGATGCCGACTTCCTGACCAACTACATGTCGATCAACGTGCTCGACGAGGTCTC GCGCATCCAGGGCGTCGGCCAGGTCACCATCTTTGGCGGCTCCGACTATGCCATGCGCATCTGGATCAAGCCGGACCAGCTCAGCCGGCTGGCGCTGACC GTGCCGGACATCGTCAACGCCGTGCAGCAACAGAACGTGCTGACCCCGGCCGGCAAGCTGGGCGGCCCGCCGGCGGCGCCGGGCACCGAGTTCGCCTACG CCGTGCAGACCCGGGGACGGCTGGAGACCCCGGAGCAGTTCGGCGAGGTGGTCGTGCGCTCCAATCCGGATGGTTCCCAGGTGCTGCTGCGCGACGTGGC GCGCATCGAGCTGGGCGCCGAAACCTATAACCAGATCGGCGCCTTCAATGGTCGGCCGGCGGCTGTGATGGCGGTCTACCAGTTGCCCGAGGCCAACGGC CTGCAGGTGGCGGAGCATATCCGCACGGCGATGCAGGGCATGCAGGCGCGCTTTCCCCAGGACATCGAGTATGTGATCTCGCTGGACACCACCAAGCCGG TGTCCGCCGGCATCGAGGAAATTGTCCACACCCTGTTCGAAGCCACCGTCATCGTCACCCTCGTGGTGTTCGTGTTCCTGCAGAACTTCCGCGCCACGCT GATCCCCACGCTGGCGGTGCCGGTGGCGCTGATCGGCACCTTCGCGGTGTTTCCGCTGTTGGGTTTCTCCATCAACACCTTCTCGCTGCTCGGCCTGGTG CTGGCCATCGGCATCGTGGTGGATGACGCCATCGTGGTGGTGGAGGGGGTCTCGGAGAAGATGGAGCGGGGCATGGAGCGGCGCCAGGCGACCATCGAGA CCATGAAGGAGGTCAGCGGCCCGGTGATCGCCACCGCGCTGTCGCTCACCGCGGTGTTCGTGCCGGTCGCCGCCATGTCCGGCATCACCGGGCGGCTCTA CCAGCAGTTCGCGATCACCATTGCCATCTCGGTGTGCATTTCGGCGGTGGTCGCGCTGTCGTTGAGTCCGGCGCTGTCCAGCACCCTGCTCAAGCCCCAT GAGCATGGCGCCCGCAAGGGCTGGCTGGGGCGGTTCTTCGCCCGCTTCAACCGAGCGCTGGACAGGGTGACGGACCGTTACATCGACCTGACCGCCCGCT TCACCCATCGCCCGCTGCGCGCGCTGCTGGTGCTCGGCGCGCTGGTGGTGGCGCTGCTCCTGCTGTTTCGCGCGGTGCCCGGCGGCTTCGTGCCGGAAGA GGATCAGGCCTACCTGATGGCCAACCTGCAGCTGCCCGACGCCGCCTCGCTGGAACGCACCCACGCCGCGGCCGCCAAGGTCGAGGCCATCCTGGCGGCC GAGCCGGCCATCGAGTCGTACACCACGGTGACCGGTTACAGCTTCCTCTCCGGCGCCTCGTCCACCAACAACGCCTTCGTTTTCATCCAGCTCAAGGACT GGGCCGAGCGCCCGGCGGCCGAGGATCAGGCCACCCGCGTCGCGCAACGGCTCAACGGCCGGCTGGCAGCCATCAGCGAGGGCATAGCCATCGCGTTTGG TCCGCCGGCCATTCCGGGCCTGGGCACCGGTTCGGGCTTCTCGATGATGCTGCAGGATCGCAGTGGCAACGCCCCCGACTACCTGGCCGAGCAGGCCCAG GCCTTTATCGAGGCAGCCAGCGCGCGTCCGGAGCTGAGCGGGCTGTACACCACCTACCGGGCCACGGTGCCGCAGATCTTCCTCGACGTGGATACCCAGA AGACCATGAAGCTGGGCGTCGCGCCGGGCGACGTCAACCAGACCCTGGGCGCCTTTCTCGGCGGAGCCTATGTCAACGACTTCAACCGCTTCGGTCGCCT GTACAAGGTGTACGTGCAGGCCGAGACCGGCTACCGGCGCGACCTTGGCGACGCATCGCTGTTCTACGTGCGCAACAGCGGCGGCGAAATGGTGCCGATG AACACCCTGCTGACCAGCGAGGCCACCAGCGGCCCGGAATTCACCTACCGCTTCAACATGTTCCGCGCGGCCGAGATCACCGGCCGGCCGGCGCCGGGCT ACACCTCGGCGCAGGCGCTGCAAGCCCTGGAGGAGGTGGCCGCCGCAGTGCTGCCCAGCGACATGTCCTATGCCTGGAACGCCATGTCGTATCAGGAAAA GGCGGCCGAGGGCTCCGGCAGCCTGGTGTTCGTCATGGCGCTGGTGTTCGTCTTTCTGATCCTCGCCGCGCAGTACGAAAGCTGGTCGCTGCCCCTGGGC GTGCTGTTCGGCACGCCGATCGCCATCTGCGGGGCGATGTTCGGCCTGTGGGTCGCGCGCTTTTTCAGCGCCAGCTACGAGAACAACGTGTTCGCGCAGA TCGGCCTGGTGATGCTCATCGGCCTGGCGGCGAAGAACGCCATCCTCATCGTCGAATTCGCCCGCACGGAAATCGAGCGCGGCAAGGAGCCGGTGGAGGC GGCGCTGGCCGCCGCGCGGCTGCGCTTCCGGCCGATCCTGATGACCTCGTTCGCCTTCATTCTGGGGGTGATACCGCTGATCCTGGCCAGTGGCGCCGGC GCCGAGGCGCGCAAGATCATGGGCATGACCGCCTTCGCCGGCATGCTCACCGCCACCCTGGTGGGCGTCGTGCTGGTGCCCGGTCTGTTCGTGGTCGTCG AGCGCTACCTCACCCGCCGC
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGCACCCGGCCGCCGGCTCGATCGGCGAGGAAGCCGAGCCATGAGCGGCGTTGCGGCGCGCCCCGTGCACATCGTCCTGTTGGCGGGCGGTCTGCTGCT GGGCGGCTGCATGGTCGGGCCGGACTACCAGCGTCCCGCCCTGGACATGCCCTCCAGCTACCGCGAGCCGGCGCCGATCGACGACACCTTCGCCAACCTG CCCTGGTGGGGGCTGTTCGCCGATCCCGCCCTCGACGCGCTGATCGAGGAGGCGCTGGCCAACAACCGCGACCTCGGCGTCGCGCTGGCGCGCATCGAAG AGGCGGCGGCGATCCTGAGCGTGGTGCGCGCCAATCAGTTTCCCTTCTTCGACATCCAGGCAGGTGCGGGCCGGACCTCGACCAGCGAGGACGTGCTGGG CGGCGGCGTGACCGACAACAGCTTCAGCCTCGGCGGCGTGGCCTCGTTCGAGGTTGACCTGTGGGGCAAGCTGCGTCGGGCGACCGAGGCGGCGCGGGCG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MGEFFVRRPVFAMVISILILIIGLVAMGRLPIAQYPDITPPEIKVEATYDGANAVNVEQSVATPLEQKVNGVENMLYMKSTNAGNGQMTLSVAFEVGSDQ DISNVLVQNRVSEGAAQLPEEVKRRGVKIKKALAFPLMLVTLRSPNGSYDADFLTNYMSINVLDEVSRIQGVGQVTIFGGSDYAMRIWIKPDQLSRLALT VPDIVNAVQQQNVLTPAGKLGGPPAAPGTEFAYAVQTRGRLETPEQFGEVVVRSNPDGSQVLLRDVARIELGAETYNQIGAFNGRPAAVMAVYQLPEANG LQVAEHIRTAMQGMQARFPQDIEYVISLDTTKPVSAGIEEIVHTLFEATVIVTLVVFVFLQNFRATLIPTLAVPVALIGTFAVFPLLGFSINTFSLLGLV LAIGIVVDDAIVVVEGVSEKMERGMERRQATIETMKEVSGPVIATALSLTAVFVPVAAMSGITGRLYQQFAITIAISVCISAVVALSLSPALSSTLLKPH EHGARKGWLGRFFARFNRALDRVTDRYIDLTARFTHRPLRALLVLGALVVALLLLFRAVPGGFVPEEDQAYLMANLQLPDAASLERTHAAAAKVEAILAA EPAIESYTTVTGYSFLSGASSTNNAFVFIQLKDWAERPAAEDQATRVAQRLNGRLAAISEGIAIAFGPPAIPGLGTGSGFSMMLQDRSGNAPDYLAEQAQ AFIEAASARPELSGLYTTYRATVPQIFLDVDTQKTMKLGVAPGDVNQTLGAFLGGAYVNDFNRFGRLYKVYVQAETGYRRDLGDASLFYVRNSGGEMVPM NTLLTSEATSGPEFTYRFNMFRAAEITGRPAPGYTSAQALQALEEVAAAVLPSDMSYAWNAMSYQEKAAEGSGSLVFVMALVFVFLILAAQYESWSLPLG VLFGTPIAICGAMFGLWVARFFSASYENNVFAQIGLVMLIGLAAKNAILIVEFARTEIERGKEPVEAALAAARLRFRPILMTSFAFILGVIPLILASGAG AEARKIMGMTAFAGMLTATLVGVVLVPGLFVVVERYLTRR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site