Pseudomonas tuomuerensis JCM 14085, PT85_RS12870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas tuomuerensis strain JCM 14085 PT85_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGAAGTGCCCAAGGCACTGGTCGCCGACGAAGTGAACCGTCTGCGTGTGCAGGCCGTCCAGCAGTTCGGTGGCAACATCAAGCCGGAAAACCTGCCTGCC GAGCTTTTCGAGGAGCAGGCCAAGCGTCGCGTGGTGCTGGGTCTGATCATCGCCGAGGTGGTCAAGCAGAACGAGCTGAAGCCCGACGAAACCCGCGTCC GTGCGCTGATCGAGGAAATGGCTTCGGCCTACCAGGAGCCCGAGCAGGTGGTGGCCTGGTACCTGAAGAACGAGAAGCAGCTGAACGAAGTGCGTTCGGT TGTACTGGAAGAACAAGTTGTAGATACTGTCCTCGGTAAGGCCAAGGTAACCGACAAGTCGGTCTCCTACGAAGAAGCTGTCAAGCCGGCGGAAGCTCCG CAAGTCGCCTGATTCTTCCCCCCGCTCGAGCACCGCATAAGCCAGCCTAGCGCTGGCTTATGTGTCTTTAGGACCGTTCAATAGGGAGCGATCGCTGGAA
DNA Sequence for Gene
>PT85_RS12870
ATGTCCCGCAATTCCTTTATGCAAATGCCTGAAATCCAGGCCGCCGGTGGCCTGGTGCCGATGGTGATCGAGCAGTCCGCTCGTGGCGAGCGCGCCTACG ACATCTATTCCCGCCTGCTCAAGGAGCGGGTGATCTTCTTGGTCGGCCAGGTCGAGGACTACATGGCCAACCTGGTGGTTGCCCAGCTGCTGTTCCTGGA AGCCGAGAACCCCGACAAGGATATCCACCTGTACATCAACTCGCCGGGCGGTTCGGTGACCGCCGGCATGTCGATCTACGACACCATGCAGTTCATCAAG CCGGACGTCACCACCTACTGCATCGGCCAGGCCTGCAGCATGGGTGCGCTGCTGCTGGCTGGCGGCGCCGCCGGCAAGCGTTACTGCCTGCCGCATTCGC GCATGATGATTCACCAGCCCCTGGGCGGTTTCCAGGGCCAGGCGTCTGACATCGAGATCCATGCCCGGGAAATCCTGACCATCCGCGAGCGTCTGAACAA GATCCTGGCTCACCACTGCAACCAGCCGATCGATGTGATCGCCCGCGATACCGACCGGGACAACTTCATGAGCGGCGAAGAAGCGGTCAAATACGGACTG ATCGACCAGGTGCTCGAGCGTCGACTGGCGCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCTGTGTGCGGCGGTCGGATATCCGGTCGCCGCAGGGTTGAAAATGCCCCTGATTGCCCTCATCTTGTGTTTCACGCCTACCGTATTGGATTGACCGAA TGACTGATACCCGCAATGGCGAGGACAACGGCAAGCTGCTTTATTGCTCCTTCTGCGGCAAGAGCCAGCACGAAGTGCGCAAGCTGATCGCCGGACCCTC TGTCTTTATCTGCGACGAGTGCGTAGATCTGTGCAACGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCCGAGAGCAATGCGCACAAATTGCCGACG CCCAAGGAGATCAGTGCGATCCTCGATCAGTATGTGATCGGTCAGGAGCGTGCCAAGAAGATTCTGGCCGTCGCTGTCTACAACCACTACAAGCGCCTCA ACCAGCGGGACAAGAAGGATGATGTCGAGCTCGGCAAGAGCAACATCCTGCTGATCGGCCCGACCGGTTCGGGCAAGACACTGCTGGCCGAAACCCTGGC
Amino Acid Sequence
>Clp protease ClpP
MSRNSFMQMPEIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIK PDVTTYCIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAREILTIRERLNKILAHHCNQPIDVIARDTDRDNFMSGEEAVKYGL IDQVLERRLAL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site