Pseudomonas tuomuerensis JCM 14085, PT85_RS12260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAACGCCCGCGCCTGGAGGGCCGCTACCAGCATGGCGACCAGGGCGCCAGCTTCCATCAGTTGCTGGACGCGTTGCGCCAGGTGCTGTCGATGGTGCTCG AGCAGCACGCCATCGAGCTGCCGCTGCAGCAGCGGCAGTACGGCATTCAGGTGACGCCGCTGCACGATGCCAGCCTGCTGGACAGCGCGGTGTTCGTGCT GGCCGCCAGCGCCGAGTGCGATTCGGAGTCGCTGCGCACGCGCCTGCCGGCGCATCTGAAGATCGGCCCGGTCGAGCACATCCGCCAACTGGTCAACCTG CACCTGCCGGGCATCCGCCTGCGTCCGCTGCCGGTGGCGCCACGGCAGATCCCCTTCCATGCCGGCAAGACCTACTTCGCGCTGGAGCTGACCCCCGACG AGCAGGAGCAGATGAAGCGTTCGGGCGGCTTCGCGCTGCATGCGTCCGGTGAATTCACCGGGCTGGAACTGAAATTCTGGGCGATCAGGGATTGAGAGAG
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| DNA Sequence for Gene |
>PT85_RS12260
ATGGATTACACAGCGAGCGACAGGACGGTCGTGCTCAGCCACAACGGCCAGCCGCCGGCGGCGGACAGCCTGCTGAGCGACGCCGGGGCCACCCCCAGGT ACGACGAGCTGGAGGCGCGCATGGTCTTCGCCGCGCGCGTGCGGCCGGCCGAGTCCTTCAGCGTCAGCCTCAACCCGCTGGTGGCGGCGGCCGCGCCGCT GCTGTCCGAGGCAGTACGTATCAGAAGCAATCCGCACGGCGAAGACCTGCACGCGCTGCAGGCGCAACTGGGCGCCGCCATCCGCCAGTTCGAGTACCGC GCCCTGCAGGACGGCGTGGAAAGCGCGCAGGTGATGGCGGCCCGCTACGTACTGTGCAGCGTACTGGACGAAGCCGTGGTGACCACGCCCTGGGGCGTGG CCGGCGAGTGGTCGCAGTTGAGCCTGCTGAGCGGCTTTCACAACGAGACCTTCGGCGGTGAGAAGGTCTTCCAGCTGCTCGAACGCCTGGCGCGCAACCC GGTCAAGCACCTGGCCATGCTCGAACTGCTGTACCTGTGCCTGGCGCTGGGCTTCGAGGGCCGCTATCGCGTGCTGCCGCGCGGCATGCTCGAGCTGGAG GCGGTACGCGACGGGCTGTACCGGCAGATTCGCCAGCTGCACGGCGATGTGCCGCGCGAGCTTTCGCCGCACTGGGAGGGACTGACGGGCGGCCAGCGGC GGCCGCTGTTCAACGTGCCGGCCTGGAAGGTGGCGCTGGCCGCCGTGGCCTGCCTGGGCGTGCTGTATGTGAGCTTCGCCTGGGCGCTGGGGGCGCAGCG CGACCACGCGCTGCAGCCCTACCTGGGCACGGACGCGGCAATTGAGTTTTCCACGCAGTCAGGGATGAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATGGACATCAAGCAATACGCGGCCCGGATCGGCCGTTTCCTGGCGCGGACCTGGGTCTGGAGCCTGCTGCTGGTGCTGCTGGCGAGCCTGCTGATCTGG TTCGTCGGCCCGCTGCTGGCGATTGCCGAGCAGCGCTTCTGGGCCTCGCCGCTCAGCCGTCTGGCCAGCATCGGCCTGCTGGTGCTGCTGTGGGGGCTGG CCCTGGCGTTCGCCGACTGGCGCGGCAAACAGCGCCAGCGCCGCGCGCAGAGCGCCGAGCAAGCCCAGGAGTCGCTACGTCAGCAAAGCCTCATCGGCGA GGAGCAGGCCGAATTGCGCCATCGCTATCGCGAGGCCCTGCGCACGCTCAAGGGGCACGGCGGAAAATGGCGCGAGGAGCTGCCCTGGTACCTGCTGATC GGCCCGCAGGGCAGCGGCAAGACCAGCCTGCTGGATTTCTCCGGACTGGAGTTCCCGCTCAATCAGGGCGCGGAGCAGCGTCTGACTCGGGAAGTCGCCG
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| Amino Acid Sequence |
>membrane protein
MDYTASDRTVVLSHNGQPPAADSLLSDAGATPRYDELEARMVFAARVRPAESFSVSLNPLVAAAAPLLSEAVRIRSNPHGEDLHALQAQLGAAIRQFEYR ALQDGVESAQVMAARYVLCSVLDEAVVTTPWGVAGEWSQLSLLSGFHNETFGGEKVFQLLERLARNPVKHLAMLELLYLCLALGFEGRYRVLPRGMLELE AVRDGLYRQIRQLHGDVPRELSPHWEGLTGGQRRPLFNVPAWKVALAAVACLGVLYVSFAWALGAQRDHALQPYLGTDAAIEFSTQSGMK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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