Pseudomonas tuomuerensis JCM 14085, PT85_RS11285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGGCGAGGAAGCCTATTCGCTGGCCATCTCCGCAGCCGAAGTGCAGCGTCGCGCTGCCCGGCGAACGGAGTTCGGTGTGATCGCCACGGATATCAGCC AGGGCGCGTTGAACCAGGCCCGTGACGCGCGTTATGACGCGCGACGGCTGGAAGCGCTGGATACCGAACGCCGCGAGCGCTATCTGCGCAACGACGCGGA TGGCTGGCGCGTGACACCGGAGCTGGCGGCGCGCGTGTGCTGCGCCCGGCTCAATGTGCTGGACCTGGACAAGGCGCCGTGGAGCGGCCTGGACGTGATT TTCTGTCAGAACCTGCTGATCTATTTCCGCCGCTGGCGGCGGCGCGACATCCTCAATGGCCTGGCCGAGCGCCTTGCCCCGGGTGGGCTGCTGGTGCTCG GTGTCGGCGAGATGACCGGCTGGCAGCATCCGGCGCTACAGCCGGTGGCCGATGAGCGGGTTCTGGCCTTTACCCGGATACGCGAATGACTGGAGTGGCT
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| DNA Sequence for Gene |
>PT85_RS11285
ATGGGGGATCGGCACGACTATGTCGCCCTGGAATGGGTCAAGGGCGAAATCGCCGAGACGCTCAACCAGGCGCGCCAGGCCCTGGAAGCGTTCGTCGAGA ACCGCGAGGACAGCACACGCCTGAGCTTCTGCCTGACCTATGTCCACCAGGTCCACGGCACCCTGCAGATGGTGGAGTTCTATGGTGCCGCCCTGCTCGC CGAGGAGATGGAGCGGCTGGCCCAGGCGCTGCTGGAGAACCGTGTCGCCGACCAGAGCGAGGCGCTGCAGATCCTCATGCAGGCCATCCTGCAGCTGCCG GTGTACCTGGATCGCGTGCACAGCACGCGCACCGATCTGCCGCTGCTGCTGTTGCCGCTGCTCAACGAACTGCGCAGTGCGCGCGGCGAGCAGCCCCTGC CGGAAACCAGCCTGTTCGCGCCGGACCTGTCCGCGCCGATTCCGGCCTTGTCGCGTGAGTCCCTGGCGCTGCTGAATACCCCCGAATTCCCCCAGTTGCT GCGCAAGCTGCGCCAGTTGCAGCAGGTGGCGATGGTGGGCCTGCTGCGCGGGCAGGAGTCGGCCAAGAATCTGGCCCAGCTGGAAAAGGTCTACCTGAAG CTCGCTGATCTGGGCCGCGAGTCGCCCCTGGAGCCGCTGTGGGAAATTGCCGCCGGCGTGGTCGAAGGGCTGGTCAGTGGCAGCGTGCCCTCCGGCCCCT CCGTGCATGTGCTGTTGCAGCAGCTGGACAAGGAGCTCAAGCGGCTGGTGAGCGAGGGGGCCGCCGGCTTCAACCATGCCGCGCCGCTGGAGCTGACCAA GAACCTGCTGTTCCACCTGGCCAAGGCGAGCTTCGAAACGCCGCGCATTGCCGAGCTGAAGGCCCGTTTCCGCCTCGACCAGGCGCTTCCGGGAGAAGCG GTGTCGGGTGCCGAGCGCGGCCAGCTGGTCGGCCCGGACCGCGGTGCGATCCGCTCGGTGGTGGCGGCCCTGTGCGAAGAGCTGGTGCGTATCAAGGACA GCCTGGACCTGTTCGTGCGCAGCGACCGGCAGAACCTGGCCGAGCTGAGCGGCCTGCAGGCACCTCTCAAGCAGATCGCCGACACCCTGGCGGTGCTGGG TTTCGCCCAGCCGCGCAAGGCCATCCTCGACCAGCTGAACACCGTGCAGCTGCTGCTCGACGGCGAAAAGACCGCCGATGATGGCGCGCTGATGGATATC GCCGGCGCGCTGCTGTATGTCGAGGCGACCCTGTCCGGCATCGCCGGCATGGATAACGACAGCCAGAGCGAGCAGAGCCGCCTGCCCACCACTGATGTGA CGCAGATCCACCAGTTGGTGATCCGTGAGGCGCGTACCGGTCTCGAACAGGCCAAGGACGCCATCATCGAGTTCATCGCCTCGCAGTGGAACCACGAACA TCTGGCCCGGGTCCCGGAGCTGCTCACCCAGGTGCGCGGCGGACTGGGCATGATTCCGCTGCAGCGCGCCGCCGAGTTGCTTGAAGCCTGCCGGCGTTAC ATCTGCGAGCGTCTGCTGGAGCCCCGTGCAGTGCCGGACTGGCAGCACCTGGATACCTTGGCCGACGCCATCACCGGCGTCGAGTACTACCTGGAACGCC TCAGCGAGGACCATGCCAGCCAGGGCGAAGTCATTCTCGACGTGGCCGAGGAAAGCCTGTGCAGCCTGGGCTATGCGCCCCGCGCGCTGCTGGCCGAGGA GGCTGCTGTTCCGGCCGAGCCGGTGCTGGACTGGCTGGCCGACGACATGCGCGAGCCGCAGATGGAACAGCCGCCTGTTGCCGCGCCGGCCACGCTGGCG GATTTCGTCGACGATCTGTTCGCCCCTGAGCAAGAGGCCGCGCCGCACACGCCCGCGCCGTCGATGTTCGAACTGCTGGAGCTGGATGCCGAGGGCCTGA CGCCTCCGGCCGAACCGCTGGCCGCGAAACCCGAGCCTGGACCCGCGCCGGTGCTGACGGTGGCCGATGTGCTGGCCGCGCCGGTGCAGGCCATCAATCC GCCCGCCCAGGATGCTCCGCCCAGCCTCCTGCCGCCGCCTGCCGACGAGGAGCCGGTGGACGAAGAGCTGCTCGAGGTGTTCATCGAGGAAGCTGGCGAG GTGCTCGACACCATCAACCAGTTCCTGCCGCAATGGCGCGCCAACAACGACAACCGTGAAGCGCTGAGCGAAGTCCGGCGCGCCTTCCACACCCTCAAGG GCAGCGGTCGCATGGTGCGCGCGCTGATCATCGGCGAACTGGCCTGGGCGGTGGAGAACCTCTTCAATCGCCTGCTGGACCGCAGCATCGAGGCTGGTCC GGCGGTGCACGAGCTGGTCGGCGAGGTGGTGGGACTGCTGCCCGAGCTGGTCGACGAGTTCGCTGCCAAGGCGCAGCGTCAGCGCGATGATGTCGACCGC CTGGCTGCCGCAGCCCATGCGCTGTCCCGCGGCCAGCAGCCTGCGCCGTCCCTCCCTCGCGCGGTGGCGGTGGATGACGCCGCCGATGCCAGCGGCCTGG ACCCGCAGTTACTGGATATCTTCCGCAACGAGGCGGAGAGCCACCTGGAGACGCTCGACCAGTTCCTGGCGGAGTGTGCGCAGATCCTGCCGCAGCCGGT CAACGACCGTCTGCAGCGGGCGCTGCATACCCTCAAGGGCAGCGCGCACATGGCCGGCATCCTGCCGATGGCCGAGGTCGCCATGCCGCTGGAGCGGCTG GTCAAGGAATTCCACAACCACCAGATTCCGGTCGATCGCGAACTGGCCGGGCTGCTCGCCCAGGCCCGCGAGCTGTTGCAGCAGGGCCTGGCGCAGCTTG ACAGCACGCCGCACGCGCCGCTGCCGGGCACCGAGGCGTTCCAGGTCGCCGTGCAGAGCCTGCAGAAGGAACGCCTGAACCAGGCCGAGGCCAAGCGCAC CAGCAGCGAACCCCATGCGTCGGAGCTGCTCGGGCGGCATCTGGGCAACCACATCGACACCCTGCTGGACAGCGAGGAGCTGCTGGCCGGCTGGCGCGAC CAGCCGCAGGCACCCAGCCCGCTGGGTGATCTGCGGGCCGCTGTGGAAGCACTCTGGCAGGGCGCCCGGCAGGCCAAGCTGGCGCCGTTGGCCGAGCTTT GCGAGGCGGTGTCGCAAGTGTATGCCGCCGTGGCGGACCAAGGCCTGGCCACCGATGCGCGCTTCTTCGAGGAAGCCCTGGCGGCCCATGAGGCGCTGAT CGGTATGCTCGACCAGGTGGCCGCCGCGCTGCAGGTCAGCCCGCGTCCGGATCGCATCGCCGCGCTGGCCGCGCTGTTGATGCCGCCAGCCCTGCTCGAT GAGCCGGCGTTCGACATTGATGCGCTGCCCGACAGCCTGCTCGAACTGGAACCGCTCGAACTGGCGTTCGATACGTCGGAGGAGGCGCCCCCCAGTCTGG AGGATGCGCCCGACGCAGCGGAGACGGGGTGCCCAGCCGCGCAGCCGGTCGACGAGCTGGACGAGGAGATGGTCGAGATCTTCCTCGACGAAGCGGGCGA CATTCTGGACAGCGCCGCCCAGTCCCTGGAGGACTGGCTGGCCGATACGCAGGACCTGGATGCGCTGGGCGGACTGCAGCGCGATCTGCACACCCTCAAG GGCGGTGCACGCATGACCGGTGTTACCGCGATCGGCGACTTGGCCCATGAACTGGAATTCCTTTACGAAGGCCTGATGCAGCAGCGCTTCACTGCCGAGC CGACCCTGGCCTGGCTGCTGCACAAGTGCCATGACCGTCTGGCCCAACAGATCGAACAACTGCAGGCCCGCGAGCCGGTGACGGTGGCCAGCTCGCTGAT CCGCGCCGTGCAGGATTATCGGGAAACCGGTGCCGTCAGCCTGGAGCCGCAGGCGGCGGAGCCGGCCACGGCCAGCCCCGAGGGCGACCTGTGGGCGGCC CTGGAGGCGGCCGAAGCACTGGATCTGGAGGGTTTCGGCGAGCTTGAAGAGATCGAGCTGCAGGTGCCTGCGGCGGGCGAGGGCGAAGTTGATGCGCTGG ATGTGCAGGCTGACCCCGAGCTGATGGCGCTGTTCCTCGAAGAGAGCTTCGGACTCATCGAGGATGCCCGCGAGGCATTGCAGCGCTGGCGCGCCGATCC GCAGAACGCGCTGGAAATCGAGACCCTGCAACGCGACCTGCACACCATCAAGGGCTGCGCGCGGATGGCCGACGTGCAACCGATCGGTGATCTTGGCTAT GAGCTGGAAATGCTCTATCGCCAGTTGGCCGATGGGCGCCTGCGCAGCGGCGAGCCGTTGTTCGATCTGCTGGAACGCAGTCACGCACGAATCAGGACGC AGCTTGAGGCCGTGCGCGACGGTCTTCCGGTCCCTGCTGGCGAGGAGCTGATCGCGGCGCTGCAGGAGTACGTGGCCGCCCCCGAGGAGCAGTTGAGCGA GCCGCTCAGCGTTACCCTGCAGCCGGTCGAGGAATCCTCGGTCGTGGCCGCCGCCGAGCCGGTGGTGCAGGCGAAGCCCGGCGATGAGGTGGACGAGGAG ATTCTGGAAATCTTCCGCGAAGAGGCCGACGAGCTCATCGAGGCGCTGCAGTCCTGTATCCAGGACTGGGACGCGATGCGCGAGGCGGTTCCCTTCGACG ACTTGTTGCGCATCCTGCATACCCTCAAGGGTGGGGCACGACTGGCCGGCCAGGCGCACATCGGTACCCTCAGTCACGAGCTGGAGCAGCGCCTGATCGA GGCGCGGCAGCAGGGCGAGCCATCCGAGGGCCTGTTCGAACTCGTGCAGAACGAGTTCGCCGTCCTGCAAGCGGCAGTGGACGGCTTGCGCGCCATCCTC AGCGAGGAAGATCTGGTCCCCGCCGCCCCGGCGCCTGTCACGCCGCCGGCGCCGCTGGCCGTCCCCGCGCCGCAGGAACAGGCGCTGGCGCCGGTCGAGC CGGTCGCGTCCACCGCCCGTGTGCTGCCCTTCGTACGCCAGGCCGAGGAGGCCCGCGAGGCGGCCGCCGCGCGCCGCGCGCCGCAGGAGCTGGTCAAGGT GCCGGCGGAACTACTGGATGACCTGGTCAACCTGGCGGGCGAGACCTCCATCTTCCGCGGCCGGGTCGAGCAGCAGGTCAACGATGTCGGCTACACCCTG GGCGAGATGGAAGCCACCATCGAACGGGTGCGCGATCAATTGCGCCGCCTGGACACCGAAACCCAGGCGCAGATCCTCAGTCGCTACCAGGCCGAGGCCG AGCGTGCCGGCTACGAGGACTTCGACCCACTGGAGATGGACCGCCATTCCCAGCTGCAGCAGTTGTCGCGGGCGCTGTTCGAGTCGGCCTCCGACCTGCT GGACCTCAAGGAAACCCTGGCAGCCAAGAACCGTGACGCGGAAACCCTGCTGCTGCAGCAGTCGCGGGTCAACACCGAACTGCAGGAAGGCCTGATGCGA ACCCGCATGGTGCCCTTCGATCGCCTGGTGCCGCGTCTGCGGCGCATCGTGCGCCAGGTGTCGGCGGAACTGGGCAAGCAGGTCGAGATGGTGGTCGGCA ACGCCGAGGGGGAAATGGACCGCAGCGTGCTGGAGCGCATCATCGCGCCCATGGAGCACATGCTGCGCAATGCCGTGGACCACGGCATCGAGCCGGTCGA GGTGCGGCGTGCCGCCGGCAAGCCGGACCAGGGCACCATCAGCCTCAACCTCGCCCGCGAGGGTGGCGAGATCGTGCTGACCCTGGCGGACGACGGCGGC GGCATTCGCCTGGACGCGGTACGCCGCAAGGCCATCGAACGCGGGCTGATGGCCGCGGACAGTGACATTACCGACCACGAGGTGCTGCAGTTCATCCTGG CGGCCGGTTTCTCCACCGCCGAGAAGATCACCCAGATCTCCGGTCGCGGCGTGGGCCTGGACGTGGTCAGCTCGGAAATCAAGCAGCTCGGCGGCTCGGT GAGCATCGAGTCGGGCGAAGGGCAGGGCACGCGCTTCATCATTCGCCTGCCGTTCACCGTGTCGGTCAACCGGGCGCTGATGGTGCATTCCGGCGAAGAT CTCTATGCCGTGCCGCTGAGCAATATCGAAGGCATCGTGCGCGTTTCGCCCTACGAGCTGGAGGCCTATTACGGCCCGGACGCGCCGCGCTTCGAGTACG CCGGGCAGCGCTACGAGCTGCGTTACCTGGGCGAACTGCTGAACAATGGCCAGCAGCCCAAGCTGATGGGGCAGACCCTGCCGCTGCCGGTGATCCTGGT GCGCTCGGCGGACCACAGCATCGCCGTGCAGGTGGACAGCCTGGCCGGCTCGCGAGAAATCGTGGTGAAGAGCCTCGGCCCGCAGTTCGCCCGGGTGGCT GGTATCTCCGGTGCCACCATCCTCGGCGATGGCCGCGTGGTGGTGATCCTCGACTTCATGACCCTGCTGCGCAAGCGCCAGCTGCAGGCGCTGCCGCGCC GCTTCGCCCAGCCGCAACTGAGCGTCGAGCCCGCCGCGCCGGAGGCCGAGGCCGAGGCGCGCGCGCTGACCGTGATGGTGGTGGACGACTCGGTCACCGT GCGCAAGGTCACCACGCGCCTGCTCGAACGCCAGGGCATGAATGTGGTCACCGCCAAGGACGGCGTCGACGCCATCACCCAGCTGCAGGAATTCAAACCG GACATCATGCTGCTGGACATCGAGATGCCGCGCATGGACGGCTTCGAAGTGGCCACCCTGGTGCGTCACGACCCGCAACTGGCGGACCTGCCGATCATCA TGATCACCTCGCGCACCGGTGAGAAACACCGGGAGCGGGCCATGGCCATCGGCGTCAACGACTACCTGGGCAAGCCCTACCAGGAGGCCCAGCTGCTCGA CCGTATCCACGCTCTGGTACAGCACCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCCGAATCGCGATTCTCGCCGACACTTCCCTGCAGCGTCACATTCTCCAGCGTGCGCTGGCCGGCAGTGGCTATCAGGTGGTGTTCAACCAGGACCC CGCCGGCATGGCGCCGGACGAGCTGCAGGACTGTGCCGCCGATCTCTGGCTGGTCGACCTGGCGCAGGGCGAAGACCTGCCCGTGCTCGATGACCTGCTG GAAGGGGACGTCCCGGTGCTGTTCGGCGAGGGCAAGGCGCCGGAGCGCAGCTCCGAACACTACCCACGCTGGGAGCGCAGCCTGTTCGGCAAGCTCAAGC GCCTGGTAGGCGATCCGGCCGCCGCGGTGGGACCGAGCCTGCAAGGCCTGCTGAGCGAAAACGAGACCGTCGAGCCGCTGACTCTGCCGGCGAGCCTGGC TCAGGCGCCGGACGAGCCGGCCCGCGAAGTCTGGCTGCTGGCCGCTTCGCTGGGTGGGCCGGTGGCGGTCAAGGCGTTTCTCGACGCGCTGCCGGCCGGC
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| Amino Acid Sequence |
>hypothetical protein
MGDRHDYVALEWVKGEIAETLNQARQALEAFVENREDSTRLSFCLTYVHQVHGTLQMVEFYGAALLAEEMERLAQALLENRVADQSEALQILMQAILQLP VYLDRVHSTRTDLPLLLLPLLNELRSARGEQPLPETSLFAPDLSAPIPALSRESLALLNTPEFPQLLRKLRQLQQVAMVGLLRGQESAKNLAQLEKVYLK LADLGRESPLEPLWEIAAGVVEGLVSGSVPSGPSVHVLLQQLDKELKRLVSEGAAGFNHAAPLELTKNLLFHLAKASFETPRIAELKARFRLDQALPGEA VSGAERGQLVGPDRGAIRSVVAALCEELVRIKDSLDLFVRSDRQNLAELSGLQAPLKQIADTLAVLGFAQPRKAILDQLNTVQLLLDGEKTADDGALMDI AGALLYVEATLSGIAGMDNDSQSEQSRLPTTDVTQIHQLVIREARTGLEQAKDAIIEFIASQWNHEHLARVPELLTQVRGGLGMIPLQRAAELLEACRRY ICERLLEPRAVPDWQHLDTLADAITGVEYYLERLSEDHASQGEVILDVAEESLCSLGYAPRALLAEEAAVPAEPVLDWLADDMREPQMEQPPVAAPATLA DFVDDLFAPEQEAAPHTPAPSMFELLELDAEGLTPPAEPLAAKPEPGPAPVLTVADVLAAPVQAINPPAQDAPPSLLPPPADEEPVDEELLEVFIEEAGE VLDTINQFLPQWRANNDNREALSEVRRAFHTLKGSGRMVRALIIGELAWAVENLFNRLLDRSIEAGPAVHELVGEVVGLLPELVDEFAAKAQRQRDDVDR LAAAAHALSRGQQPAPSLPRAVAVDDAADASGLDPQLLDIFRNEAESHLETLDQFLAECAQILPQPVNDRLQRALHTLKGSAHMAGILPMAEVAMPLERL VKEFHNHQIPVDRELAGLLAQARELLQQGLAQLDSTPHAPLPGTEAFQVAVQSLQKERLNQAEAKRTSSEPHASELLGRHLGNHIDTLLDSEELLAGWRD QPQAPSPLGDLRAAVEALWQGARQAKLAPLAELCEAVSQVYAAVADQGLATDARFFEEALAAHEALIGMLDQVAAALQVSPRPDRIAALAALLMPPALLD EPAFDIDALPDSLLELEPLELAFDTSEEAPPSLEDAPDAAETGCPAAQPVDELDEEMVEIFLDEAGDILDSAAQSLEDWLADTQDLDALGGLQRDLHTLK GGARMTGVTAIGDLAHELEFLYEGLMQQRFTAEPTLAWLLHKCHDRLAQQIEQLQAREPVTVASSLIRAVQDYRETGAVSLEPQAAEPATASPEGDLWAA LEAAEALDLEGFGELEEIELQVPAAGEGEVDALDVQADPELMALFLEESFGLIEDAREALQRWRADPQNALEIETLQRDLHTIKGCARMADVQPIGDLGY ELEMLYRQLADGRLRSGEPLFDLLERSHARIRTQLEAVRDGLPVPAGEELIAALQEYVAAPEEQLSEPLSVTLQPVEESSVVAAAEPVVQAKPGDEVDEE ILEIFREEADELIEALQSCIQDWDAMREAVPFDDLLRILHTLKGGARLAGQAHIGTLSHELEQRLIEARQQGEPSEGLFELVQNEFAVLQAAVDGLRAIL SEEDLVPAAPAPVTPPAPLAVPAPQEQALAPVEPVASTARVLPFVRQAEEAREAAAARRAPQELVKVPAELLDDLVNLAGETSIFRGRVEQQVNDVGYTL GEMEATIERVRDQLRRLDTETQAQILSRYQAEAERAGYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETLAAKNRDAETLLLQQSRVNTELQEGLMR TRMVPFDRLVPRLRRIVRQVSAELGKQVEMVVGNAEGEMDRSVLERIIAPMEHMLRNAVDHGIEPVEVRRAAGKPDQGTISLNLAREGGEIVLTLADDGG GIRLDAVRRKAIERGLMAADSDITDHEVLQFILAAGFSTAEKITQISGRGVGLDVVSSEIKQLGGSVSIESGEGQGTRFIIRLPFTVSVNRALMVHSGED LYAVPLSNIEGIVRVSPYELEAYYGPDAPRFEYAGQRYELRYLGELLNNGQQPKLMGQTLPLPVILVRSADHSIAVQVDSLAGSREIVVKSLGPQFARVA GISGATILGDGRVVVILDFMTLLRKRQLQALPRRFAQPQLSVEPAAPEAEAEARALTVMVVDDSVTVRKVTTRLLERQGMNVVTAKDGVDAITQLQEFKP DIMLLDIEMPRMDGFEVATLVRHDPQLADLPIIMITSRTGEKHRERAMAIGVNDYLGKPYQEAQLLDRIHALVQHP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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