Pseudomonas tuomuerensis JCM 14085, PT85_RS11240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas tuomuerensis strain JCM 14085 PT85_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCTGGCCGCTGGCCGCCTGCAGAAGGCCGGCGAGAACGCTGCCCAGGTCAGCCTCAAGCTGGAAGACGGCAGCACCTACGCCCACACCGGCAAGCTGGA GTTCTCCGAAGTCAGCGTGGACGCCAGCACCGGTTCGGTGACCCTGCGCGCGCTGTTCCCCAACCCGGACAAGCTGCTGCTGCCGGGCATGTTCGTGAAG GCTGAACTGGTCAGCGGCGTGCTGGAAAACGCCATCCTGGCCCCCCAGCAGGGCATCGCCCGCGACCCGCGCGGTCGCCCGATGGCCATGGTGGTGAACA TGGAAGGCAAGGTCGAGGCGCGCATCGTCGAGGCCGAGCGTGCCGTAGGCAACCGCTGGCTGGTCAGCGCCGGTCTCAAGCCGGGCGACCGGCTGATCAC TGAAGGCCTGCAGTACATCCAGCCCGGTATCTCAGTGCAGACCAAGCAGGCCGGTAACCTCACTGCCAACCAACAGTAAGTCGGCCCAGGGATATTCGTC
DNA Sequence for Gene
>PT85_RS11240
ATGCCTAATTTCTTCATTGACCGCCCAATCTTCGCCTGGGTGATCGCCCTGGTGGTCATGCTCGCCGGCGGTCTAGGGCTGCTGCAGTTGCCGGTCAGTC AGTACCCGAGCATCGCCGCGCCCTCGGTGAACATCAGTCTCGTCTACCCGGGCGCCTCGGCGCAGACCGTGCAGGACACCGTCATTCAGGTCATCGAACA GCAGATGAGCGGCCTGGATGGCATGCGCTACATGTCCGCCGAAGCCAACAACGACGGCAGCGGCTCGATCAAGATTACCTTCGAGCAGGGCACCGACCCG AACATCGCCCAGGTTCAGGTGCAGAACAAGCTGCAGCTGGCCACCCCGCTGCTGCCGATGGAAGTGCAGCAGCAGGGTATCCGCGTCACCAAGGCGGCTG GTGGCTTCCTGATGGTGGTGGCGCTGGTGTCCAGCGATGGCCGCTACAGCAACATCGACCTGTCCGACTACGTGATTTCCAACATCCAGGATCCGCTGTC GCGGACCCCGGGCGTGGGTGACTTCACCGTGTTCGGCTCTTCCTACTCCATGCGTATCTGGCTCGATCCGGCCAAGCTGGTGAGCTTCGCGCTGACGCCC ATGGACGTCAGCAACGCCATCAAGGCGCAGAACGTGCAGGTCTCCACCGGCCAGCTCGGTGGCCTGCCGGCGGTGCCCGGCCAGCAACTGACCGCCACCA TCATCGGCAAGACCCGCCTGCAGAGCCCGGAAGAGTTTCGCAACATCCTGCTCAAGGTGAACCAGGATGGCTCACAGGTGCGACTGAGCGATGTGGCGCG CGTCGAAATGGGCGCCATGCGTGAGAATATCTCCGCCAAGTACAACGGCAAGCCGGCCACGGGTATCGCCATTACCCTGGCCACCGGCGCCAACGCCCTG GCCACCGCCGAAGCGGTGCGCGACACCATCTCGCGCCTGGAGCCGTTCCTGCCTGAAGGCATGGAAGTCGTGTATCCGTTCGACACCACCCCGGTGATCT CGGCGTCCATCTCCAGCGTGGTGATGACCCTGTTCGAGGCCGTCGTGCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGCGCCACGCTGAT CCCCACGTTGGCGGTACCGGTGGTCCTGCTGGGTACCTTCGGCGTGCTGTATCTGTTCGGCTACAGCGTCAACACCCTGACCATGTTCGCCATGGTGCTG GCCATCGGCCTGCTGGTGGACGACGCCATCGTGGTAGTGGAAAACGTCGAGCGGGTGATGGTCGAGGACGGCCTGCCGCCCCGCGAGGCGACACGCAAGT CCATGGGGCAAATCCAGGGCGCGCTGGTGGGTATCGGCATCGTGCTGTCCGCCGTGTTCGTGCCGATGGCTTTCATGGCCGGTTCCGTGGGCGTGATCTA CCGCCAGTTCGCCATCACCATCGCCTCGGCCATGACGCTGTCGGTGCTGGTGGCGCTGATCTTCACCCCGGCACTCTGCGCGACCCTGCTCAAGCCAATC GCCAAGGGCCATCATGAGGCGAAGCGCGGCTTCTTCGGCTGGTTCAACCGCACCTTCGAAAACGGCGTGCACACCTACGAGGGTGGCGTGCGGCGCGTGC TGCGCAACCGCTGGTCGTTCCTGGGTATCTGGGTCGCCATCGTGGTGGCCGTGGGCGTGCTGTTCTTCCGCGTGCCGGCCGCGTTCCTGCCGCCGGAAGA CCAGGGCGTGATGTTCGTCCAGGTGGTCGCGCCGGTAGGTGCGTCCTTCGAGCGCACCGAGAAGATGGTCGACCAGATGCGCGACTACCTGCTCACCGAA GAAGCCGATGCGGTGGAAGGCGTGATGAGCGTGCAAGGCTTCAGCTTCGCCGGTCGTGGCCAGAACGCCGCCATTATGTTCGTCGGCCTGAAGGACTGGG CCAAGCGTCCCGAAGCCAAGGACGCGGTGTTCGCGCTGCAGCAGCGCGCCCAGGCTCGCTTCTTCCAATACCGCGACGCCATGGCCTTCGCCATCGTCCC GCCGTCGGTGATCGAACTGGGCAACGCCTCGGGCTTCGACGTCTATCTGCAGGACATGGCGGGTCTCGGCCACGAGGCGCTGATGAACGCCCGTAACCAG TTGCTCGGCATGGCCGCGCAGCACCCGGCCCTGGTCGGTGTGCGGCCCAACGGCCTTAACGACGAACCGCAGTACCAGATCCTCATCGACGACGAGAAGG CGCAGGTGCTTGGCCTGTCGATGAATGACATCAACAACACCCTGTCCATCGCCTGGGGTTCGGCCTATGTGAACGACTTCATCGACCGCGGTCGGGTGAA GAAGGTGTTCATGCAGGGTGAGGCGCATGCGCGCATGAACCCGGAAGACCTGGACAAGTGGTACATCCGCAACAACAAGGGCGAGATGGTGCCGTTCAGC GCCTTCGCCACCGGTACCTGGACCTACGGCTCGCCGAAGCTGTCGCGCTACAACGGTGTGGAATCCATCCAGATCCAGGGCGGCGCCGCGCCGGGCTACA GCACCGGTGACGCCATGGCGGCCATCGAGGAGATCGCCGCCCAGTTGCCCAACGGCATCGGCATCAGCTGGACCGGCCTGTCGTTCGAAGAGCGCATGTC CGGCAGTCAGCTGCCCATCCTGCTCGGCCTGGCGCTGCTGGTGGTGTTCCTGGCCCTGGCCGCCCTGTACGAGAGCTGGTCGATCCCGTTCGCGGTGATG CTGGTGGTGCCGCTGGGCCTGATCGGTGCCGTGCTGTTCACCCTGGGACGCGGCCTGACCAACGACGTGTTCTTCCAGGTGGGCTTGCTGACCACCATCG GCCTGACCGCCAAGAACGCCATCCTGATCGTCGAGTTCGCCAAGGACCTCTACGACCAGGGCATGGACCTGGTCGACGCGGCGGTGGAAGCCTGCCGCAT GCGTCTGCGTCCGATCGTCATGACCTCGCTGGCCTTCACCATGGGCGTGGTGCCGCTGGCCCTGGCCACGGGTGCGGGTGCCGGCAGCGCGCATTCCATC GGGACCGGCGTGGTCGGCGGGATGCTCACCGCCACCGTGCTGGTGATTTTCTGGGTGCCCCTGTTCTTTGTCGGGGTGACCGCGCTGTTCAAGACCCCGC GCAAGACTGAGCGCAACGGAGAGGCACGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAAGTCCGCATTGACACTGGCGCTGGCGGCAGCGCTTGCAGGCTGCTCCCTGGCTCCCGACTACCAGCGACCCGAATCGGGGTTGCCGGAGCGCTGGAC CCCGGCCGCGCTGCAGGCCGACGCCGGCCAGGTAGCCAACGTGCCGGCCGCCGAGCTGGGCTGGCAGGGGTTCTTCCGCGATGCCCGTCTGCAGCAGCTG ATCGGCATTGCCCTGGAGAACAACCGCGACCTGCGCATCGCCACCCTCAACGTCGAGGCGTTCCGCGCCCAGTACCGTGTCCAGCGCGCCGACCTGTTCC CGGGTGTCAGCGCTGATGCCGCCATGAGCCGCAGCCATACGCCCGAAACGGTTAATCCGCTGGCCGCCGGCACCAGCACCCAGTACAGCGCCACCCTGGG GCTGTCGTGGGAGCTGGACCTGTTCGGCCGGGTGCGCAGCCTGCGTGACCAGGCGCTGGAGCAGTACTTCGCCAGCGAGGCGGCGCAGCGCAGCGCGAAG
Amino Acid Sequence
>multidrug efflux RND transporter permease subunit
MPNFFIDRPIFAWVIALVVMLAGGLGLLQLPVSQYPSIAAPSVNISLVYPGASAQTVQDTVIQVIEQQMSGLDGMRYMSAEANNDGSGSIKITFEQGTDP NIAQVQVQNKLQLATPLLPMEVQQQGIRVTKAAGGFLMVVALVSSDGRYSNIDLSDYVISNIQDPLSRTPGVGDFTVFGSSYSMRIWLDPAKLVSFALTP MDVSNAIKAQNVQVSTGQLGGLPAVPGQQLTATIIGKTRLQSPEEFRNILLKVNQDGSQVRLSDVARVEMGAMRENISAKYNGKPATGIAITLATGANAL ATAEAVRDTISRLEPFLPEGMEVVYPFDTTPVISASISSVVMTLFEAVVLVFLVMYLFLQNFRATLIPTLAVPVVLLGTFGVLYLFGYSVNTLTMFAMVL AIGLLVDDAIVVVENVERVMVEDGLPPREATRKSMGQIQGALVGIGIVLSAVFVPMAFMAGSVGVIYRQFAITIASAMTLSVLVALIFTPALCATLLKPI AKGHHEAKRGFFGWFNRTFENGVHTYEGGVRRVLRNRWSFLGIWVAIVVAVGVLFFRVPAAFLPPEDQGVMFVQVVAPVGASFERTEKMVDQMRDYLLTE EADAVEGVMSVQGFSFAGRGQNAAIMFVGLKDWAKRPEAKDAVFALQQRAQARFFQYRDAMAFAIVPPSVIELGNASGFDVYLQDMAGLGHEALMNARNQ LLGMAAQHPALVGVRPNGLNDEPQYQILIDDEKAQVLGLSMNDINNTLSIAWGSAYVNDFIDRGRVKKVFMQGEAHARMNPEDLDKWYIRNNKGEMVPFS AFATGTWTYGSPKLSRYNGVESIQIQGGAAPGYSTGDAMAAIEEIAAQLPNGIGISWTGLSFEERMSGSQLPILLGLALLVVFLALAALYESWSIPFAVM LVVPLGLIGAVLFTLGRGLTNDVFFQVGLLTTIGLTAKNAILIVEFAKDLYDQGMDLVDAAVEACRMRLRPIVMTSLAFTMGVVPLALATGAGAGSAHSI GTGVVGGMLTATVLVIFWVPLFFVGVTALFKTPRKTERNGEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site