Pseudomonas tuomuerensis JCM 14085, PT85_RS08725

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00672	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.287.130	-	-	-	407	500	3.3E-22
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	273	406	1.3E-16
Pfam	PF08448	PAS fold	IPR013656	PAS fold-4	294	397	6.0E-12
Coils	Coil	Coil	-	-	230	260	-
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	589	603	1.7E-15
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	620	638	1.7E-15
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	412	502	8.0E-6
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	550	661	1.0E-26
SMART	SM00091	pas_2	IPR000014	PAS domain	287	355	4.4E-6
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	645	658	1.7E-15
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	507	665	4.4E-41
PANTHER	PTHR43065	SENSOR HISTIDINE KINASE	-	-	244	665	5.5E-64
CDD	cd00130	PAS	IPR000014	PAS domain	296	394	0.00152345
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	408	501	5.89E-8
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	414	500	1.7E-9
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	554	660	2.3E-21
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	607	617	1.7E-15
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	276	395	1.92E-15
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	288	403	2.0E-9
Gene3D	G3DSA:6.10.340.10	-	-	-	150	243	4.7E-12
SUPERFAMILY	SSF158472	HAMP domain-like	-	-	185	234	5.62E-7
CDD	cd06225	HAMP	-	-	188	232	2.12101E-7
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	493	662	1.7E-38
Pfam	PF00672	HAMP domain	IPR003660	HAMP domain	184	234	5.5E-10
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	416	498	2.66049E-6
Coils	Coil	Coil	-	-	432	452	-
SMART	SM00304	HAMP_11	IPR003660	HAMP domain	185	238	6.5E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.