Pseudomonas tuomuerensis JCM 14085, PT85_RS08235 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas tuomuerensis strain JCM 14085 PT85_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AATGCTGGCCGCCGCACTGGGCGTTGCTTCGCTTCTGAAGGCCGAGCCGATGCTGTTCACCGGGCTCAAGTACCTGGGTGCCGCATACCTCTGCTACATC GGCATTGGCATGTTGCGCGGCGCCTGGCGCCAGTGGCGGCATCCCGCGGATGCACGGGTCGAACCCGAGCAGGACCTGGGTCAGCCGTTCCGCCGCGCCC TGCTGCTCAGCCTGTCGAACCCCAAGGCGATCCTGTTCTTCGTGTCCTTCTTCATCCAGTTCGTCGACCCGGCCTACGCCCATCCGGGATTGTCGTTCCT GGTGCTGGGCGCGATTTTGCAAATCATCAGTCTCAGCTACCTGAGCCTCCTGATCTTTACCGGCGCCCGCCTGGCGCACTGGTTCCGCCGACGGCAGCGT CTGGCCGCCAGCGCCACCAGCGGCGTGGGCGCCCTGTTCGTCGGCTTTGGCGTGAAGCTGGCCACCGCAACCCTGACCTGATTACCGCTACGAGACTCCC
DNA Sequence for Gene
>PT85_RS08235 |carB
ATGCCAAAACGTACAGACCTCAAAAGCATTCTGATCCTCGGCGCCGGCCCCATCGTGATCGGCCAGGCGTGCGAGTTCGACTATTCCGGCGCCCAGGCCT GCAAGGCCCTGCGCGAGGAAGGCTTCCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGACTGTCGCCAAGATCATCGAGAAGGAGCGCCCTGACGCGCTGCTGCCGACCATGGGCGGCCAGACCGCGCTGAACTGCGCCCTG GACCTGGAACGCCACGGCGTGCTGGAAAAGTTCGGCGTGGAAATGATCGGCGCCAACGCCGACACCATCGACAAGGCCGAGGACCGTTCGCGCTTCGACA AGGCCATGCGTGACATCGGGCTGGCGTGCCCGCGTTCCGGCATCGCCCACAACATGGAGGAAGCCTACGGCGTCCTCGACCAGGTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGTGGCGGCATCGCCTACAACCGTGAGGAATTCGAGGAAATCTGCAACCGCGGTCTGGATCTGTCGCCG ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAGGAGTACGAGATGGAGGTGGTCCGCGACAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAGAACTTCGACCCGATGGGCGTGCACACCGGCGACTCCATCACCGTGGCGCCGGCGCAGACGCTGACCGACAAGGAATACCAGATCATGCGCAACGC CTCGCTGGCGGTGCTGCGCGAGATCGGCGTGGAAACCGGCGGCTCCAACGTGCAGTTCGGCATCAACCCGAAGGACGGCCGCATGGTCGTCATCGAGATG AACCCGCGCGTGTCGCGTTCCTCGGCGCTGGCCTCCAAGGCCACCGGCTTCCCGATCGCCAAGATCGCCGCCAAGCTGGCGGTTGGCTACACCCTGGACG AGCTGAAGAACGACATCACCGGCGGCCGCACCCCGGCGTCCTTCGAGCCGGCCATCGACTACGTGGTCACCAAGGTGCCGCGCTTCGCCTTCGAGAAGTT CCCCAAGGCCGACGCCCGCCTGACCACCCAGATGAAGTCCGTGGGCGAGGTCATGGCCATCGGCCGGACCTTCCAGGAGTCCATGCAGAAGGCCCTGCGC GGCCTGGAGGTCGGCGCCACCGGTTTCGATCCCAAGCTGGATCTGGCCGATCCGGAAGCCGAGAGCGTCCTCAAGCGTGAGCTGACCGTGCCCAGCGCCG AGCGCGTCTGGTATGTGGCCGATGCCTTCCGCGCCGGCAAGACCGTCGACGAGGTGTTCGAACTCACCAACATCGACCCCTGGTTCCTGGTGCAGATCGA GGACCTGGTCAAGGAAGAGGAGCGGGTCAAGACCCTCGGCCTGGCCAGCATCGACCGTGACCTGATGTTCCGCCTGAAGCGCAAGGGCTTCTCCGATGCC CGCCTGGCGACCCTGCTGGGCGTGAGCGAGAAAAGCCTGCGCAGCCACCGTCACAAGCTGAAGGTGTTGCCGGTCTACAAGCGCGTCGACACCTGCGCCG CCGAATTCCAGACCGACACCGCCTACATGTATTCGACCTACGAGGAAGAGTGCGAGGCCAACCCGTCCAGCCGCGACAAGATCATGGTCATCGGTGGCGG TCCGAACCGCATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTGCATGCCGCGCTGGCCATGCGTGAAGACGGCTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCCGATCGCCTGTACTTCGAGCCGGTGACCCTGGAAGACGTGCTGGAAATCTGCCGCGTCGAGCAGC CCAAGGGCGTGATCGTGCAGTACGGTGGCCAGACCCCGCTGAAGCTGTGCCGCGCTCTGGAAGAGGCCGGCGTGCCGATCATCGGCACCAGCCCGGACGC CATCGACCGCGCCGAAGACCGTGAGCGGTTCCAGCAGATGGTGCAGCGCCTGAACCTGCGCCAGCCGCAGAACGCCACCGCACGCAGCGAAGACGAAGCC CTGGCGCACGCCAAGGCCATCGGCTTCCCGCTGGTGGTGCGTCCGTCCTACGTGCTGGGCGGCCGGGCGATGGAAATCGTTTACCAGGAAGAAGAGCTCA AGCGCTACATGCGCGAGGCGGTGAAGGTCTCCAACGACAGCCCGGTACTGCTGGACCATTTCCTGAATTCGGCCATCGAAGTGGATATCGATGCCGTATG CGATGGCAAGGACGTGGTGATCGGCGCCATCATGCAGCACATCGAGCAGGCCGGCATCCACTCCGGCGACTCGGCGTGCTCGCTGCCGGCCTACTCGCTG CCCCAGCACATTCAGGACGAAATCCGCGACCAGGTGAAGAAGATGGCGCTGGAGCTGGGTGTGGTCGGTCTCATGAACGTGCAGATGGCCGTTCAGGGCG ACGACATCTATGTACTGGAAGTGAACCCGCGCGCTTCGCGTACCGTGCCGTTCGTGTCCAAGTGCATCGGCGAATCGCTGGCCAAGGTCGCGGCCCGTGT CATGGCCGGCAAGACCCTGCAGGAAACCGGTTTTACCGAGGAAATCATTCCGGAGTACTTCAGCGTCAAGGAGGCCGTGTTCCCCTTTGCCAAGTTCCCC GGGGTGGATACCATCCTCGGCCCGGAAATGAAATCCACCGGCGAAGTCATGGGTGTCGGCGACAGCTTCGCCGAGGCCTTTGCCAAGGCTCAGCTGGGTG CCAGCGAGATCCTGCCCACCGGCGGTTGCGCCTTTATCAGTGTGCGAGAGGACGACAAGCCTTTCGTGGCCGATGTGGCGCGTGACCTGATCGCTCAGGG CTTCGAAGTGGTGGCTACTGCCGGAACCGCGAAGGTGATCGAGGCGGCTGGCTTGCCGGTGCGCCGCGTCAACAAGGTGACCGAAGGCCGTCCGCATGTG GTGGACATGATCAAGAACGAGGAAGTGACCCTGATCATCAACACCACCGAGGGGCGCCAGTCGATCGCCGATTCTTACTCCATCCGTCGTAACGCCCTGC AGCACAAGGTCTGCATCACCACCACCCTGGCGGGTGGTCAGGCAGTCTGTGAGGCCATCAAGTTCGGTCCCGAGCGGACCGTGCGCCGGCTGCAGGATCT GCACGCAGGAATCAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGAAATACCCGATGACCGTCCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGAAGATCCTCAAGGCGGAGCGCCCGAAGATCAGCCAGGCCATCGCCGAAGC GCGTGAGCTGGGGGATCTGAAGGAGAACGCCGAGTACCACGCCGCCCGCGAACAGCAGGGGCTGGCCGAGGCGCGCATCCGTGACATCGAGGGGCGTTTG CAGAACGCCCAGATCATCGATGTCTCGACCCTTCCGCATACCGGCAAGGTGATCTTCGGCACCACAGTGGACATCGTGAACGTCGAAACCGACGAGGAAG TGACCTACCAGATCGTCGGTGACGACGAGGCGGACATCAAGTCCGGCAAGTTGTCGGTCAGCTCGCCGATCGCCCGCGCGTTGGTCGGCAAGTCCGAAGG CGACGTGGTGACGGTGCGCACCCCTAGTGGCGTGGTCGAGTACGAGATTGTCGAAGTCCGTCACGTCTGATCCGCCGCGCCTGCGCGCGCCGGTGATCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLERHGVLEKFGVEMIGANADTIDKAEDRSRFDKAMRDIGLACPRSGIAHNMEEAYGVLDQVGFPCIIRPSFTMGGTGGGIAYNREEFEEICNRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGINPKDGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGRTPASFEPAIDYVVTKVPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALR GLEVGATGFDPKLDLADPEAESVLKRELTVPSAERVWYVADAFRAGKTVDEVFELTNIDPWFLVQIEDLVKEEERVKTLGLASIDRDLMFRLKRKGFSDA RLATLLGVSEKSLRSHRHKLKVLPVYKRVDTCAAEFQTDTAYMYSTYEEECEANPSSRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEQPKGVIVQYGGQTPLKLCRALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEDEA LAHAKAIGFPLVVRPSYVLGGRAMEIVYQEEELKRYMREAVKVSNDSPVLLDHFLNSAIEVDIDAVCDGKDVVIGAIMQHIEQAGIHSGDSACSLPAYSL PQHIQDEIRDQVKKMALELGVVGLMNVQMAVQGDDIYVLEVNPRASRTVPFVSKCIGESLAKVAARVMAGKTLQETGFTEEIIPEYFSVKEAVFPFAKFP GVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTGGCAFISVREDDKPFVADVARDLIAQGFEVVATAGTAKVIEAAGLPVRRVNKVTEGRPHV VDMIKNEEVTLIINTTEGRQSIADSYSIRRNALQHKVCITTTLAGGQAVCEAIKFGPERTVRRLQDLHAGIKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site