Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCGTGACCATCGGCGACGATGTGGAAATCGGCGCGAATACCACTGTAGATCGCGGAGCGCTGGCCGATACCCTGATCGGTAACGGCGTCAAACTCGAC AACCAGATCATGATCGCGCACAACGTGCAGATCGGCGACCACACCGCCATGGCGGGCTGCGTGGGCATTTCCGGCAGCACCAAGATCGGCCGTCATTGCA TGATCGCCGGCGGCGTCGGCATGGTCGGGCACATCGAAGTCTGCGACAACGTGTTCGTCACCGGTATGACCATGGTGACCCGTTCGATCACTGAACCGGG CTCCTATTCCTCCGGTACGGCCATGCAACCGGCGGCCGAGTGGCGCAAGAGTGCGGCGCGCATCCGTCAGCTCGACGAGATGGCCCGCCGTCTGCAACAA CTTGAAAAACGTCTGGCGGCCGTGACCCCGGACGGGGATGCCTCATCTGAAGCCTGAAGGTTTCAACCGCATTCTTCCTGAGTATCAAGGCTTCCTGAAC
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DNA Sequence for Gene |
>PT85_RS06535
ATGATGGACATCAACGAAATACGTGAACTGCTGCCGCACCGCTACCCGTTCCTGCTGGTGGACCGGGTCGAGGCCATTGATCTGGAAGGCAAGACCATTC GCGCCTACAAGAACGTCACGATCAACGAGCCGTTCTTCAACGGGCATTTCCCGCAGCACCCGATCATGCCGGGCGTGCTGATCATCGAAGCCATGGCCCA GGCCGCCGGCCTCCTGGGTTTCCGCATGCTGGATGCCACGCCGGCGGACGGCACCCTCTACTACTTCGTCGGTTCCGACAACCTGCGCTTCCGTCAGCCG GTCGTGCCCGGCGACAAGCTGACCCTGCAGGCGCGCTTCCTTAGCGCCAAGCGTGGCATCTGGAAGTTCGCCTGCGAGGCGAGCGTGGACGACAAGCCGG TCTGCTCGGCGGAAATCATTTGTGCGGAACGCAAACTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTTCGATTGACCCGCGCGCGATCATCGACCCGAGTGCCCGTCTGGCCGAAAACGTCAGCGTCGGCCCCTGGTCGATCATCGGCCCGGATGTGGAGATCGG TGAAGGTACCGTCATCGGCCCGCATGTGATCGTCAAGGGTCCCACCCGCATCGGTCGCAACAACCAGATCTTCCAGTTCTCTTCCATCGGCGAAGACACT CCCGACCTCAAGTACAAGGGTGAAGCCACTCGCCTGGTGATCGGTGACCACAATGTCATCCGTGAAGGCGTGACCCTGCACCGGGGCACCGTGCAGGACC GTTCGGAAACCACCATTGGCAGCCACAACCTGATCATGGCTTACGCCCATGTGGGGCATGACTGCGTGATCGGCAACCACTGCATCCTGGTGAACAACAC CGCGCTGGCGGGTCACGTGGTGATGGACGACTGGGCGATCCTCTCCGGCTACACCCTGGTGCACCAGCACGTGCGTATCGGTGCCCACAGCTTCTCCGGC
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Amino Acid Sequence |
>3-hydroxyacyl-ACP dehydratase
MMDINEIRELLPHRYPFLLVDRVEAIDLEGKTIRAYKNVTINEPFFNGHFPQHPIMPGVLIIEAMAQAAGLLGFRMLDATPADGTLYYFVGSDNLRFRQP VVPGDKLTLQARFLSAKRGIWKFACEASVDDKPVCSAEIICAERKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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