Pseudomonas tuomuerensis JCM 14085, PT85_RS05005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGAGGGCACAGGAATTGAATCTGTTCAGGTCAGTACTTGGCAGAATTTCTCCGCCCCTGAATATATGCGAGGCGCTAAAGCCATTCGCTTGGAGCTT GAGGTTCTGAGAAAGCGCCAATCCGATGATCCCTTCATTACGGAGCTGCGTAGCCTTCAGGAAAGCCTTGATTTCCTCAAGGGTGTGGATGTTTCGCCAG ACAACGTGGCGGCATTTACCCTGGATAATGCCGCGCAGGTTCCGGAAACCCCGATCAAGCCGAAGAAGGCCTTGATCCTGGCTCTAGGCCTGGTACTCGG CGGCATGCTGGGCGTGTTCATCGCCTTGGTGCGCGGTATGGTGCGCGGGGCGCTGGCCAAGCAATCGCGTGCGCCTGTCACGGTTTGATCCTCTTCCCCG GGCAGTCCTCTGCGGGCTGCCCGCTCCCCACGCTGGAGCCTGCGCCACCGCCCCTGTTACCATCGCGCCTTCGATTTGTCCCCCCCTTTCGAGAGTCGCC
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| DNA Sequence for Gene |
>PT85_RS05005
ATGACCACCGTTCGTACCCGCATTGCGCCGTCGCCCACCGGCGATCCGCACGTCGGCACTGCCTACATCGCCCTGTTCAACCTCTGCTTCGCCCGTCAGC ACGGCGGTCAGTTCATTCTGCGCATCGAGGACACCGATCAGGTGCGTTCGACCCGCGAATCCGAGCAGCAGATCTATGACGCGCTGCGCTGGCTGGGTAT CGAGTGGGACGAGGGCCCGGATGTCGGCGGTCCGCACGGTCCGTATCGGCAGAGCGAGCGGGGCGCGATCTACAAGAAATACTCGGACGAGCTGGTCGCC AAGGGCCACGCCTTCCCGTGCTTCTGCTCCGCCGAGCGCCTGGATGCGGTCCGCGCCGAGCAGATGGCCAGCAAGGAAACCCCGCGCTACGACGGCCACT GCATGCATATCGCACCCGAGGAGGCGCAGCGTCGCGTCGCCGCCGGCGAATCGCACGTGGTGCGCATGAAGGTGCCGAGCGAAGGCGTCTGCGTGGTCAA GGACATGCTGCGCGGCGAAGTGGAGATCGGCTGGGATCGCATCGACATGCAGGTGCTGATGAAGGCCGATGGCCTGCCCACCTACTTCCTGGCCAACGTG GTGGATGATCACCTGATGGGCATCACCCACGTGCTGCGCGGCGAGGAATGGCTGCCGTCCGCGCCCAAGCTGCTCAAGCTGTACGAGTACTTCGGCTGGG AAGCACCGGTGAACTGCTATATGCCGCTGCTGCGCAACCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCCACCTCGATCACCTTCTACCAGCGCAT GGGCTTCCTGCCGCAGGCGATGCTCAACTACCTGGGCCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCACACTCGACGAAATGATCGCCAAC TTCGACATCACCCGCGTGTCGCTGGGTGGCCCGATCTTCGATCTGGAAAAACTCTCCTGGCTGAACGGCCAGTGGTTGCGCGAGCTGCCGGTGGAGCGCT TCGCTGCGGAAGTGCAGAAGTGGGCGTTCAATCCCGAGTACCTGATGCAGATCGCCCCGCACGTGCAGGGCCGGGTGGAAACCTTCAGCCAGATCGCGCC GCTGGCCGCGTTCTTCTTCTCCGGCGGGCTGAACCTGGACGCGTCGCTGTTCGAGCACAAGAAGCTGTCGCCCGAGCAGGTGCGCCAGGCCATGCAGCTG GTGCTGTGGAAGCTCGAAGCCCTGCGCCAGTGGAGCAAGGACGGCATCACCGCGGTGATCCAGGCGGTGGCCGAGTCCATGGGCCTCAAGCTGCGCGACC TGATGCCGCTGATGTTCCCGGCCATCACCGGCCAGGCCAGCTCGGTATCGGTGCTCGACGCCATGGAAATCCTCGGTCCGGACCTGACTCGTTTCCGCCT GCGCCAGGCCATCGAACTGCTCGGTGGCGTGTCGAAGAAGGAAAACAAGGAGTGGGAGAAGCTGCTGGCGGCCATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCAGTGTTTCCTGTGATTCATGGGGGCCGGCATCGCTGGCCCTTTTCATTACTGCAGTACGGGAGTCGTCTCGCATGTTTGAAATCCAGCCCATGAGCC CGGAGCGTTACCGCAAGGAAACCCGCACCATCACCCTGGCCATCCTGGCCATCTTCGTGTTGCTGGGACTGACCTCGGCCACCGTCGCTGTGAAACTGTT CGGCGAGCCGGGCGGCGACAACTTCCGCTGGAACCTGCTGGGCGTGCTGACCGGCCTGGCAGCGACCGTGGCCATTGTGCGCCTCAAGCTCTGGTCGACG CCCTGGATGGCGCCGGCGGTGTATGGCTGGCTGCTCAAGCGCAGCCTGATGCGCGTCACCAATCAGATGCACCAGGTCAAGGCCGGTGTGGAGGCTGGAG ATCCGGCGGCGATGAAGCTGCTGCGCTTCTACCACCTGGGCGCGACCCAGATGTTTCAGCTCGACGGCAACCTCACCGAGCTGAGCCAGATGGTGCGCGA
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQVRSTRESEQQIYDALRWLGIEWDEGPDVGGPHGPYRQSERGAIYKKYSDELVA KGHAFPCFCSAERLDAVRAEQMASKETPRYDGHCMHIAPEEAQRRVAAGESHVVRMKVPSEGVCVVKDMLRGEVEIGWDRIDMQVLMKADGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLLKLYEYFGWEAPVNCYMPLLRNPDKSKLSKRKNPTSITFYQRMGFLPQAMLNYLGRMGWSMPDEREKFTLDEMIAN FDITRVSLGGPIFDLEKLSWLNGQWLRELPVERFAAEVQKWAFNPEYLMQIAPHVQGRVETFSQIAPLAAFFFSGGLNLDASLFEHKKLSPEQVRQAMQL VLWKLEALRQWSKDGITAVIQAVAESMGLKLRDLMPLMFPAITGQASSVSVLDAMEILGPDLTRFRLRQAIELLGGVSKKENKEWEKLLAAIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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