Pseudomonas tuomuerensis JCM 14085, PT85_RS04085
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATGACGTCCTTCCAGTTGGTCACGCCCCCCGAATGCGGGCCGTTGTCGGACTGCCGCCTGCGTGTCTACCTGCGCGAGGACGACCAGCGCGGCCAGTTC CACCTGGTCGGCCACCGCGCCAGCGACGGCAGCCTGGTGTACACCAACGCGATCATGGTCGACATGCTGATGGAATGAGGCCGCTGCGCTCAGTACCGGC CGGCCGGTGACGCAGGGAAGGCTGGCTCGCTGAGGTCGCGGTGCTTGATTCTGATCATGGGGCGCAGCCGCCGCGAGCGGCTAGGATGGCGGTGTCTGGG TGATAAATAGAAATTAGTAAATTGATATTCAAATATTATTAGTTTGTTTTGATTTAACCGGATCGACACACTAGCCAGGCCTGTCAGTCAGAAGGCCTGC GCTGCCGCATGGGCGTGTCTGACCAGGGGTACCGGCCGCAGAGCCGGCCCGACGAGTCGTGCTGACAGGCTTCCCAGCGTGCATAGGACTCCCGGTAATG
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| DNA Sequence for Gene |
>PT85_RS04085
ATCCCCGCAGACGATTCCTTTCCTTCCCCTTCCTACAACTACGCCGTCGTACGTCAATTCACCCTGATGACCCTGTTCTGGGGGGTGGTGGGCATGGCCA TGGGCGTGGTCATCGCGGCCCAGCTGGTCTGGCCGGAGCTTAACCTCGGCCTGCCCTGGACCAGCTTCGGACGCATCCGGCCCATCCACACCAACCTGGT GATCTTTGCCTTCGGCGGCGGCGCGTTGTTCGCCACCTCCTTCTACGTGGTGCAACGTACCAGCCGGGCGCGGCTGGTCTCGGACGGCCTGGCCCGCTTC GTGTTCTGGGGCTGGCAGGCGGCCATTGTGGCCATGCTGATCAGCTATCCGCTCGGCTACACCACCTCCAAGGAATACGCCGAGATGGAATGGCCGATCG CCCTGTGGATCACGCTGGTGTGGATCGCCTACGCCTATCTGTTCTTCGGCACCATCGCCCGGCGCACCGTCAGTCACATCTACGTGGGCAACTGGTTCTA CGGCGCCTTCATCGTGGTGACCGCCATGGTGCACATCGTCAACCACATCGCCACCCCGGTGAGCTGGCTGAAGTCCTACCCGGTGTATTCCGGCGCCACC GACGCAATGATCCAGTGGTGGTACGGCCACAGTGTGGTCGGCTTCATCCTCTCGGTGGGCTTCCTCGGCATGATGTATTACTTCGTGCCCAAGCAGGCCG AGCGGCCGATCTACTCCTACCGGCTGTCCATCGTGCACTTCTGGGCGATTATTTCGCTTTACATCTGGGCCGGTCCGCATCACCTGCACTACACCGCGCT GCCCGATTGGGCGCAGACCCTCGGCATGGTGATGTCGGTGATTCTGCTGGCGCCCAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCCGGGGCC TGGCATAAACTGCGCGACGACCCGATCCTGCGCTTCCTGGTGGTATCGCTGGCGTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGGTGAAGA CGGTCAACTCGCTCTCCCACTACACCGACTGGACCGTCGGCCACGTGCACGCCGGCGCCCTCGGCTGGGTCGCGATGATCAGCATCGGCACGCTCTACCA CATGATTCCCCGCCTGTGGGGGCGCGAGCGCATGTACAGCAGCCGGCTGATCAGCGCGCACTTCTGGCTGGCGACCATTGGCACCGTGCTGTACATCGCC TCGATGTGGGTGAACGGCATCACCCAGGGTCTGATGTGGCGCGCGGTGAACCAGGACGGCACGCTGACCTATTCGTTTGTCGAGGCGCTGGAAGCCAGCC ACCCCGGCCTGATGATCCGCCTGTTCGGCGGCGCCATCTTCGCCAGCGGCATGTTGCTGATGGTCTGGAACAGCTGGCGCACCGTGCGCGCCGGTCAGGT GAACCCGTTACCCCTTGCCCTGGAGGCTCGTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATCTTCGTGCTTCTTTCCGTGCTGGTCGGCGGGCTGTGCCTGGCCGTGCTGCGCACCCCCGACGCCGACCTGCGCCAGGCCGCCCTGCAGCCCTTCGC CGACGATCCGCCGGCGGCGCGACAACTGGAACAGGAAACCGGCTTGCGCTGCGAGCGCGTGGTCGAGGTGCCGTTCGAAGACCCGCGACCTTTCCATCTG GAGGCCTGAGTTTTCCCCCACGTCCAGGGACGGACGCTCCCCTTCGCGCCGCATGCGGCGCGTTTTTTGTTCAGAGCAGCGGCGACCAGTCGCCCGACTC GCCGACAACGTCCCGCACGCAGTCGATGGCGCGGGCAACGGTTACCGAGCAGCGCTCGCGGGCGTAGATCAGGTAGACCGGGTAGGTGAACTCCGGCGCC AGCGGAACCCGTTCGAGCACGCCGCTCTCCAGGTAGCCCTGCACCACGCGGCTGCGAAAATAGCCGCTGCCGCCGGCTTCCAGCAGGAACTGCAGGGCCA
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| Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit I
MPADDSFPSPSYNYAVVRQFTLMTLFWGVVGMAMGVVIAAQLVWPELNLGLPWTSFGRIRPIHTNLVIFAFGGGALFATSFYVVQRTSRARLVSDGLARF VFWGWQAAIVAMLISYPLGYTTSKEYAEMEWPIALWITLVWIAYAYLFFGTIARRTVSHIYVGNWFYGAFIVVTAMVHIVNHIATPVSWLKSYPVYSGAT DAMIQWWYGHSVVGFILSVGFLGMMYYFVPKQAERPIYSYRLSIVHFWAIISLYIWAGPHHLHYTALPDWAQTLGMVMSVILLAPSWGGMINGMMTLSGA WHKLRDDPILRFLVVSLAFYGMSTFEGPMMAVKTVNSLSHYTDWTVGHVHAGALGWVAMISIGTLYHMIPRLWGRERMYSSRLISAHFWLATIGTVLYIA SMWVNGITQGLMWRAVNQDGTLTYSFVEALEASHPGLMIRLFGGAIFASGMLLMVWNSWRTVRAGQVNPLPLALEARA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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