Pseudomonas tuomuerensis JCM 14085, PT85_RS16865
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_11, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCGGCCGGACGCAACTCGTCGGTGAACTCGCAGCGCTGCATGAGCACGGTGAGGATGCGTCGCTTCTGCTCGTTCTGCACCAGAATCTGCAGGCCGCC GACGCACATGTCGCGCAGCGAGCCCAGCGACAGCTGCGGATCGGCGCTGAGTTTCTCGGCGATCTGCTCGGGCGGCAGGCGCACCTGGTTAAGCATGGCG GTGAACAGGTCGGCCTTGTTCTGGAAGTGCCAGTAGACGGCGCCCCGGGTGACCCCGGCGGCCCGGGCAATGTGCTCCAGACTGGTGTGCGCCACCCCGC GCTCGAGAAACAGCTGTTCGGCGGCGTTCAGAATGGCGGCGCGGGTCTTCTCGGCATCTTCTTTGGTTCGACGCATGGGGTGGGTCCGGGGCCTCGGCAG CAGGAAAGGAGGCGGCATTGTCGATTCATGATTTACAAACGTCAATGTATGTAAGAGAGTCGCAGCCTCGCGGCGCGCTCCAGTCAGGAATATGTAGCTC
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| DNA Sequence for Gene |
>PT85_RS16865
ATGCCCATTCGTCTGCTGCTGATTCTGGGTGCCCTGTCGGCCTTCGGGCCGCTGGCCATCGATTTCTATCTGCCCAGTTTTCCCGCCCTGGCTCAGGCGT TCAGCACCGACGTCGAGCATGTGCAGCAGTCGCTGGCGGTGTATTTCATCGGCCTGGCGTTCGGCCAGCTGATCTACGGGCCCCTGGCCGACCGCTACGG CCGGCGCGGGCCGCTGCTGTTCGGCGTGACGCTGTTCGTGCTGTCGTCGCTGGCCTGCGCGCTGGCGCCGAGCCTCGACGCGCTGATCGCCGCGCGCCTG GCCCAGGCACTGGGCGGTTGCGCCGGCATGGTGGTGTCACGCGCGGTGGTGCGCGATCTCTGCGAGCCACGCGACGCCGCCAAGGTGTTCTCGCAGCTGA TGCTGGTCATGGGGGTGGCGCCGATTCTCGCACCGCTCGCCGGCGGTCTATTGCTGCAGCTGTTCGGCTGGCAGTCGATCTTCTACAGCCTGACGCTGTT CAGTGCGCTGGTCGGCCTGGCGCTGTACCGCTGGCTGCCGGAAACCCTGCCGGCCGGCGCCGAGCGCTTGCCGCTACGCGGTAGCCTGGGCCGTTACCTG GGACTGTTCCGTGACCGCGAGTTCCTCACCTTCGCCCTGACAGGCGGGCTGTCGATCTCCGCCATGTTCGCCTACGTGGCCGGCTCGCCGTTCGTGTTCA TCGAACTGTACGGCGTGCCCGCCGAGCACTACGGCTGGCTGTTCGGCGTCAATGCCGCCGGCTTCATCCTCTCCGCCCAGGTGAACGCCTGGCTGATGCG CTTCCGCGGCCCGGGATTCTGGCTGCGCCGGCTGAGCGCTCTGTTCCTGTTCTGCGCTTTGTTGCTGCTGCTGTTTGCGGCCTGGCGCGCGCCGCTCTGG CTGCTGATGCTGCCGCTGTTCCTCGCCATGGGCTGCCTGGGCTGCATCCTGCCCAACGCCGCCGCCTGCGCGATGGCGCGCCAGGGCGGCCAGGCGGGCA GTGCCTCGGCCTTGATGGGCAGTCTGCAGTTTGCCGTGGCGGCGCTGGCCAGTGCGCTGGTTGGCGTGCTGCATGATGGCAGTGCGCTGCCGATGGCCCT GGTGATCGCCGGCTGCGCGCTGCTGGCGGCGCTGCTGGCCTGGTACAGCGGCCAGGTGGAGGCCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAGCGCTTTCCCATCTCGGCAGGTTCTGGCGAGGTGTGGCAGGCGAACCATACTCGAAGCCATCAAGGGCGTGGCGGCGAGGCAGACATCCATGAGTTAC CCACAGGATTACCGGCGTTCACTGGCGGAGCCCGCCGACTTCTGGGCCGAGCAGGCCCGTGATCTGGACTGGTTCCGGGCGCCGCGCGAAACCCTGCGTG CGCTGGACGATGGGACGCACCGCTGGTTTGCCGATGCGCTACTCAACACTGCCTATCTGGCGCTGGACCGGCATGTCGAGAACGGCCGGGGTGAACAGCC CGCGCTGCTCTACGATTCGCCGGTCAGCGACGTGAAGCGTCAGTACAGCTACCGCCAGTTGCGCGACGAGGTCGCCCGGCTGGCCGGTGCGTTGCGCGCA CTGGGAGTGGAGAAGGGCGACCGGGTGGTCATCTACATGCCCATGGTGCCGGAGGCGGCCATGGCCATGCTGGCCTGCGCGCGCCTGGGGGCGGTGCATT
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| Amino Acid Sequence |
>Bcr/CflA family drug resistance efflux transporter
MPIRLLLILGALSAFGPLAIDFYLPSFPALAQAFSTDVEHVQQSLAVYFIGLAFGQLIYGPLADRYGRRGPLLFGVTLFVLSSLACALAPSLDALIAARL AQALGGCAGMVVSRAVVRDLCEPRDAAKVFSQLMLVMGVAPILAPLAGGLLLQLFGWQSIFYSLTLFSALVGLALYRWLPETLPAGAERLPLRGSLGRYL GLFRDREFLTFALTGGLSISAMFAYVAGSPFVFIELYGVPAEHYGWLFGVNAAGFILSAQVNAWLMRFRGPGFWLRRLSALFLFCALLLLLFAAWRAPLW LLMLPLFLAMGCLGCILPNAAACAMARQGGQAGSASALMGSLQFAVAALASALVGVLHDGSALPMALVIAGCALLAALLAWYSGQVEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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