Pseudomonas taetrolens DSM 21104, TU78_RS18110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 8_311461_44.6276, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGATTCAAAGTACCGCGCAGCTCGCCTTTGAGCGCCGCCGCATACTGCTCGAAACCTTCCAGCTCACCCAGCAACCGCAGGGTTTCCTGATGGAACAGC TCGCCCTTGCTGGTCAGGCTGAACCCGCCCCGCCCGCGATGGCACAACACCAGCCCCAGATTGGCTTCGAGCTGACTCATGTAGGTGCTGATCGCCGACG TCGAGAGGTTGAGCGCCTGCTGCGCATTGGCAAAACCCTGATGCCTGACCACGCTGGCGAAAATGCGCAATAGTTTGAGATCGGGTAAAGCACTGGCCAT AGAGAGCTCACTGATCCTGTCGGCGTTAGCATGTATGCGCCTTCAGGGTATTGGCATGAATTCGATAACCGGAGTCTAACGCCTACCACCGCATTAGTTT AGAAAAACCTGAACTAAGTATTTGCCCACAGGGATTCTTCCCGCCTCATGCCTTTCGCAGAATCGGTCGCCATAACCACAACAAACGACGAGGCTATCCC
|
|
| DNA Sequence for Gene |
>TU78_RS18110
GTGGAAAAAATCCTTCACCAACCACTGGGCGGTAATGAAATGCCGCGCTTCGCCGGCATCGCCACCATGATGCGGCTACCCCACTTGCAATCGGCCAAAG GCCTGGACGCCGCGTTTATCGGCGTGCCACTGGATATCGGCACCTCACTGCGGCCCGGTACACGTTTTGGCCCCCGTGAAATCCGCGCCGAGTCGGTCAT GATTCGCCCCTACAACATGGCAACCGGCGCCGCACCGTTCGACTCCCTGTCGGTGGCTGACATCGGCGATGTGGCAATCAACACCTTCAACCTGCTGGAT GCGGTCCGCATCATCGAAGAGTCGTACCACGAGATTCTTGAGCATGATGTGATCCCCCTGACCCTGGGCGGCGACCACACCATCACCCTGCCGATCCTGC GGGCGATCCACAAGAAACACGGCAAGGTTGGCCTGGTGCATATCGACGCCCACGCCGATGTAAACGACCACATGTTTGGCGAGAAAATCGCCCACGGCAC CACCTTCCGCCGCGCCGTGGAAGAAGGTCTGCTGGACTGTGACCGCGTGGTGCAAATCGGCCTGCGAGCCCAGGGCTATACCGCTGAAGACTTCAACTGG TGCCGCAAACAGGGTTTTCGCGTGGTCCAGGCCGAAGAGTGCTGGCATAAATCCCTGGCACCGCTCATGGCCGAAGTGCGTGAAAAGGTCGGCAATGGCC CGGTATACCTGAGCTTTGATATCGACGGCATCGACCCGGCGTGGGCACCCGGCACCGGAACCCCGGAAATCGGCGGCCTGACCACGATTCAGGCGATGGA AATCATCCGCGGCTGTCAGGGCCTCGACCTGGTCGGGTGCGATCTGGTAGAAGTCTCGCCGCCGTTCGACACCACCGGCAACACCTCATTACTGGGCGCC AATCTGCTCTACGAAATGCTCTGCGTGCTGCCCGGCGTCGTGCATCGATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGACGTTCCACCGGTGCTATCAAGTCCTGGACTTGAAAGCACCGCGCCACACCCGCGTGACTAGCAGCATTCATAAAAACAAAAATCGGAGACTCGCCAT CATGGCTTTAGATCTACTGGTCGTCCTTATTTACGCCGCTGCAATGCTAGTGCTCGGTTACTACGGCATGCGCAAGGCAAAAACCCACGAAGATTACCTG GTCGCCGGGCGCAACCTGGGACCGACACTCTACATGGGCACCATGGCCGCCACCGTACTCGGCGGCGCGTCGACCGTGGGCACCGTGCGCCTGGGGTATG TGCACGGTATTTCGGGCTTCTGGCTGTGTGCCGCGCTGGGCTGCGGGATCATCGCGCTCAACCTGTTCCTGGCCAAGCCGCTGCTCAAGCTGAAGATATT CACTGTCACCCAGGTCCTGGAGAAGCGTTACAACCCCATGGCGCGTCAGGCCAGTGCAATCATTATGCTGGCCTATGCGCTGATGATTGGCGTGACCTCG
|
|
| Amino Acid Sequence |
>agmatinase
MEKILHQPLGGNEMPRFAGIATMMRLPHLQSAKGLDAAFIGVPLDIGTSLRPGTRFGPREIRAESVMIRPYNMATGAAPFDSLSVADIGDVAINTFNLLD AVRIIEESYHEILEHDVIPLTLGGDHTITLPILRAIHKKHGKVGLVHIDAHADVNDHMFGEKIAHGTTFRRAVEEGLLDCDRVVQIGLRAQGYTAEDFNW CRKQGFRVVQAEECWHKSLAPLMAEVREKVGNGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLVGCDLVEVSPPFDTTGNTSLLGA NLLYEMLCVLPGVVHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|