Pseudomonas taetrolens DSM 21104, TU78_RS17635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 7_313147_64.1738, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCCCAGCTTGGCATCAGCGAACTGAGCAGGGTAAAGCCGGCTGCCGAAAACAGCGCAAACACCATCACCGGTTTGCGACCGAAGGCATCGGAAATGGGG CCGGTAATCAACAAGCCAACGGCCAGCATGGCGGTCGCCACGGACAAAATCAGGCTGCTCTGCGCCGCGTTGATCCCGTACTCGTGGGACAGCAACGGCA TCATCGGTTGTACGCAATACAGCAGGGCAAAGGTTGCAAATCCACCCGAGAACAGGGCCAGCACCGTGCGCATAAAAAGCGGTGTGCCTTTTTCGATAAA CACGTCATTCAACGGGGCGACTGCATCACCCGGGACGGGAGGTGGAATGTCGTGGGCGAGTGGAGCGACAGCAGTTTTCACGGGGACCTCAAAAGAGCGC AAAGCCGAACGGCAATGACAAAAGAATATAGGCCACTAACGATTCTTTCCAATATATTGTTCGACCTGTTTGATAGGTTATACGACTCAATGGAGCCTTC
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| DNA Sequence for Gene |
>TU78_RS17635
ATGGAATTGCGTCATTTGCGCTACTTCATTGCCGTCGCCGAAGAGCTGCACTTCGGCCGTGCAGCCCAGGTGCTGGGCATTTCGCAACCACCTTTAAGTC AGCAAATCCAGGCGCTGGAGCAAGAACTGGGGGCGCGGCTGTTTGATCGGACCAACCGTCGGGTTGAGCTGAGCGAAGCCGGGCGATTGTTTCTGGAAGA GGCGCGACGGGTACTGGCTCAGGTCGACAAAGCGGCTGATGTGGCCCGGCGTGCGCAGTTGGGTGAGCTGGGTGAACTGAAGATCGGGTTTACCTCTTCG GCGCCGTTCAGTTCGAGTATTCCCCAGGCTATTTTTTCATTTCGCCAGGCCTTCCCGGCCGTACACCTGAACCTGCAGGAGATGAGCAGCCGCGAAGTGG CCGAAGCGCTGGTGGACGAGTCCATCGAAGTTGGCATGATGCGTCCGTTGGTGTTGCCCGAATCATTGAGTGCGGTGGAATTGTTTCGTGAGCCCCTGGT GGCGGTCATTCGTGCCGACCATCCATTGGCCGAAGGCAGCGAGCACGGCCTGCACCTGGCGGCACTGGCGAACGAACCCTTTGTTTTCTTCCCGCGCAGC TATGGCAGCGGGTTATACGCACAGTTGCTCAGCCTGGCGCGGCAAGCCGGTTTCAGCCCGCACTTCTCACAGGAAGCCGGTGAAGCCATGACCATCATCG GCCTGGTCTCGGCGGGCTTGGGCGTGTCGGTACTGCCGGCCTCGTTCCAGCACATGCGAATCAAAGGGGTGGTCTACCGGCCGTTGCTGGACCCGGATGC CAACACGGCAGTGTGGCTGGTGCAACGCAAGGGCACGCCATCTCCCATGGCGAATACGTTTGCGCAACTGCTGACGCGCAAGACGGTACAGCCCTCACCT TGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACACCGGGAGTGGTTTTTCGTGTGACGTTTTGCGACGGCTAGGCCGCCGGACGCGGCCTCGTTCCACTCGTGCGCTGCGGCAGAGGGGGGACGGCAAAC GAGCGGCAGCGGGCCGGATTGATTACCCCGGCAGTAACTTATCCACAGCCAGTGCCACATCGCGGTTCAGGCCCTGCAGATTATCGGCCGATGAGGCCGT CGCGAGGGCGCAACGCAGCAGTTCATGGGTGTGTTCGAGGGTTTCTTCGTATTCGGGTGTGTGGGTCATGGTTTAGCTCTCTACGTCAATTTGGAGTGCT CACCATTTGCTTGCACACAAGAGGGTGGCAGCTGTACGTGGGTGTGCAAGACCGAGGACATAGAACTCGGCAGGCTCGAAAGCCTCCCACGCGCAGCCGC CATAAATCGGGCTGATGCTGCAGCACTATGTCTAACGGACTTGCACGTCCGGTCACCCTGGGGGATGACGAAACGGAGGCTAGCGATCGAAAGAGACAGG
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEAGRLFLEEARRVLAQVDKAADVARRAQLGELGELKIGFTSS APFSSSIPQAIFSFRQAFPAVHLNLQEMSSREVAEALVDESIEVGMMRPLVLPESLSAVELFREPLVAVIRADHPLAEGSEHGLHLAALANEPFVFFPRS YGSGLYAQLLSLARQAGFSPHFSQEAGEAMTIIGLVSAGLGVSVLPASFQHMRIKGVVYRPLLDPDANTAVWLVQRKGTPSPMANTFAQLLTRKTVQPSP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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