Pseudomonas taetrolens DSM 21104, TU78_RS17365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 7_313147_64.1738, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGGGGCTGATAGGCGCAGGCGTGGTGTTTTGGTATATGCAGGCGCTGATGCTGGAGCGAGGTTCTTCCTATCGCCCCGAAATATTCATGGCCAGCGTG GAGATGATCAAATCACATTTCTGGACCGGTCTGGGGCTGGGGATGCGCTATCACGTCACGTCTGTCGGCTTGACCTTTGATCACTCGCATAACTTGTTCA CCAGTGTAGGGATTGTTTATGGTCTGCCGGGCTTGATCTTCTGGAGTGTCGCCTGGTTCTCAGTCCTGTTCTACGCTTGGCGTGCACGTACGACTGTTCT CGGTCAGGGTGTGATCGGGGTTTGGGTGTTTTCGATGCTGGCCATGCAATTTGATGCTGCCAGCCTGCTGGATTCACCCCGTGCAGAGTGGTTCATTACC TGGCTGCCGGTGGCCCTTGCGACTCTTTTGACGTTCAAGAAGGCGTCGATTGACGCCTGTGATAAAATTTCGCGTTTTCCCTAATTCAGTGAGCTCTACG
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| DNA Sequence for Gene |
>TU78_RS17365
ATGAGTGATGCACCGCGTGAAGCGGAACAGAGTTCAAGCCTGAAAATATACTTTCGGCTTTTGACTTATGTGAAACCCTATATCGGCCTTTTCCTGCTGA GTATTCTCGGGTTTCTGATTTTCGCTTCGACCCAGCCAATGCTTGGTTACATCCTCAAGTATTTCGTCGACGGCTTGTCCAATCCGGATGCCGTGTTGTT TCCTTCCGTCCCGTACCTGCGCGATTTGCGTCTGCTGCAGGCCGTGCCGTTGCTGATTGTGTTCATCGCGGCCTGGCAAGGACTGGGATCATTCCTGGGC AACTACTTCCTGGCCAAAGTATCGCTTGGGCTGGTGCACGACCTGCGGGTCCAGTTGTTCAACAACCTGCTGGTGTTGCCGAACCGTTATTTTGACCAGC ACAACTCGGGTCACCTGATTTCCCGTATCACCTTCAACGTGACGATGGTGACCGGTGCCGCTACAGATGCGATCAAGGTCGTTATCCGTGAAGGCATGAC GGTGGTTTTCCTGTTTGCTTCATTGCTGTGGATGAACTGGCGCCTGACGCTGGTAATGATCGCCATCCTGCCGCTGATTGCGGTGATGGTCAGCACGGCC AGCAAGAAATTCCGCAAGCAGAGCAAGAAAATCCAGGCGGCAATGGGCGATGTCACCCATGTGGCTTCGGAAACCATTCAGGGCTATCGCGTGGTTCGCA GCTTCGGCGGCGAAACCTACGAGCAGAAGCGCTTCCTGGAAGCCAGCCAGAGCAACACTGACAAGCAATTGCGCATGACCCGCACCGGGGCGATTTATAC CCCGATGCTGCAACTGGTCATTTACATCGCCATGGGCATCCTGATGTTCCTGGTGCTGTACCTGCGCGGTGATGCCTCGGCGGGTGACATGATTGCCTAT ATCACCCTGGCCGGCCTGTTGCCCAAGCCGATTCGCCAGCTGTCGGAAGTCAGCTCGACGATTCAGAAAGGTGTGGCGGGTGCTGAAAGCATCTTTGAAC AACTGGATGAAAAACCGGAAGTCGACACGGGCACCGTTGAGCGTGATCACGTCAGCGGACGGCTTGAGGTGCGTCACCTCAACTTCACCTATCCGGGGAC CGATCGCCAGGTGCTCAAGGATGTGACGTTCTCGGTTGAGCCCGGGCAGATGGTGGCGCTGGTAGGGCGTTCGGGCAGTGGTAAATCAACGCTGGCCAAC CTGATTCCGCGTTTCTATCACCATAACTCGGGCGAAATCCTGCTCGACGGCGTCGAGATCGAGCAGTACCGCCTGATCAACCTGCGTCGTCACATTGCGC AGGTGACCCAGCACGTGACCCTGTTCAGCGATACCGTGGCCAATAACATTGCCTACGGCGATCTGGCCGGTGCACCTCGTGAGGAGATCGAGAAAGCCGC GCGGGATGCCTACGCGATGGACTTTATCGAGCAACTGCCACAAGGGCTGGACACCCAGGTCGGTGAAAACGGCGTATTGCTTTCCGGCGGTCAGCGCCAG CGTCTGGCAATCGCCCGGGCCCTGCTTAAAAATGCTCCGTTGCTGATTCTCGATGAAGCGACCTCCGCGCTGGATACCGAGTCCGAGCGTCACATTCAGG CAGCGCTGGACCATGTCATGCAGGGCCGAACCACGCTGGTGATCGCTCACCGCCTGACGACCATCGAAAAAGCCGACCTGATTCTGGTCATGGACCAGGG TCAGATTGTAGAGCGCGGCACGCACGCCGAGCTGCTGGCACAAAATGGTTATTACGCCAGACTGCACTCGATGGGGCTCGATACCCCTGAGACCTCTGGC GATATCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCGATACAGCCCTTGCAGGAGCCGTGTGCTCCTGCAAGGGCTGTATCAATTCTGGCAGGCCATGTGTTGTAGCTCTCTTCTGATTCTCATTCGTTGCG ATTAATACCGTGAACTGACCTGCGTTCACCCTGTGTTAATATCGCGCCCCTGTTCATTTTGTATGTGGGTTCTCCATGAAGTTGTCCATGCCGCAATTCG ATCAAGCCCCTGTCTTGGTGGTAGGCGATGTCATGCTCGACCGTTATTGGCATGGCGGGACCTCACGGATTTCCCCTGAGGCGCCGGTGCCGGTAGTCAA GGTCGAGCAAATCGAAGACCGTCCGGGCGGTGCTGCCAACGTTGCGCTAAACATCGCTGCACTCGGTGCGCCTGCCTCGCTGGTCGGTGTGACCGGTGAC GACGAAGCTGCCAATAGTCTGGCCAACAGCCTTGAAGGCGCTGGCGTACGTGCTCTGTTCCAGCGCATCGCGCATCAACCGACCATCGTCAAACTGCGGG
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| Amino Acid Sequence |
>lipid transporter ATP-binding/permease
MSDAPREAEQSSSLKIYFRLLTYVKPYIGLFLLSILGFLIFASTQPMLGYILKYFVDGLSNPDAVLFPSVPYLRDLRLLQAVPLLIVFIAAWQGLGSFLG NYFLAKVSLGLVHDLRVQLFNNLLVLPNRYFDQHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVVFLFASLLWMNWRLTLVMIAILPLIAVMVSTA SKKFRKQSKKIQAAMGDVTHVASETIQGYRVVRSFGGETYEQKRFLEASQSNTDKQLRMTRTGAIYTPMLQLVIYIAMGILMFLVLYLRGDASAGDMIAY ITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEKPEVDTGTVERDHVSGRLEVRHLNFTYPGTDRQVLKDVTFSVEPGQMVALVGRSGSGKSTLAN LIPRFYHHNSGEILLDGVEIEQYRLINLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPREEIEKAARDAYAMDFIEQLPQGLDTQVGENGVLLSGGQRQ RLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLTTIEKADLILVMDQGQIVERGTHAELLAQNGYYARLHSMGLDTPETSG DIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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