Strain | Pseudomonas taetrolens strain DSM 21104 6_420177_45.4403, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCACTGGCGTTCTACGGCATGTCGACCTTCGAAGGCCCGATGATGGCCATCAAGACCGTCAACGCCCTCTCCCACTACACCGACTGGACCATCGGCCAC GTACACGCCGGTGCGCTGGGCTGGGTTGCCATGATCTCGATCGGCGCGCTGTACCACATGATCCCGAAAATCTTCGGTCGCCCGCAGATGTACAGCCTGG GTCTGATCAATGCGCACTTCTGGCTGGCGACGATCGGCACCGTGCTGTACATCGCGTCGATGTGGGTCAACGGCATCGCCCAAGGCCTGATGTGGCGCGC AGTCAATGCCGACGGCACGCTGACCTATTCCTTCGTCGAAACCCTGGTGGCCAGCCACCCGGGCTATGTCGTGCGCCTGATCGGCGGGGCGATCTTCTTC ATCGGCATGTTGCTGATGGCTTACAACACTTGGCGCACCGTGCGTAACGCCGAGCCCGCCGAAGTCGTAGCCGCCGCGCAGATGGCCTGAGGAGTTCGCC
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DNA Sequence for Gene |
>TU78_RS16355
ATGAACCATGAAGTCGTAGAGAAAAATATTGGTCTGATGCTGCTGCTGATGATCCTGTGCGTAAGCGTCGGCGGTCTGACACAGATCGTCCCGCTGTTCT TTGAAGACGTGACCAACACCCCGGTGGAAGGCATGAAGCCCTACACCGCCCTGCAACTGGAAGGCCGCGATATTTATATCCGCGAAGGCTGTGTGCAGTG TCACTCGCAGATGATTCGTCCGTTCCGGGCCGAGACTGAGCGTTACGGCCATTACTCAGTCGCCGGTGAAAGTGTCTGGGATCACCCGTTCCTGTGGGGT TCCAAACGCACCGGACCGGATCTGGCAAGGGTCGGCAGCCGCTATTCGGATGACTGGCACCGCGCACACTTGTACAACCCGCGCAACGTGGTACCCGAGT CGAAAATGCCGGCCTATCCGTGGCTGGTATCAAACCCGGTCGACAGTAGCCATACCGAGAAAAAACTCGAAGTCATGCGCACCCTCGGCGTGCCGTATAC CGACGACGACATCGCCAACGCCAAACAGTCGGTGCAGGGAAAAACCGAAATGGACGCGCTGGTGGCGTACCTGCAAGTACTCGGCACTGCCATCAAGAGC AAGAGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCATGGTTGAGATGAGCAGTGGAATGATTCGCGGCCTGGGCACCGTCGTGGTGGCGGTGGCTTTTATCGGCCTGTCGCTGTGGGTATTCAGCCCTCGGC GCAAATCCGAGTTCGACGACGCAACCTTGCTGCCCTTCAAGGACGATCCAGAGGCCATTCAACACGTCGAGCAAGAGCAAGCATCTAGGAGTAACAAAGC ATGACCACCTTCTGGAGTGTTTATATCTGCGTGCTGACCATCGGTACGCTGATCGGCCTGAGCTGGCTGCTGTTCGCTACCCGCAAGGGAGAAACCAAAG GCGAAACGATCGAAACCATGGGGCACAGCTACGATGGCATCGAGGAGTACGACAACCCGCTGCCACAGTGGTGGTTCATGTTGTTCGTGGGCACCCTGGT GTTTGCCGTCGGGTATTTGATCCTCTATCCGGGCCTGGGCAACTGGAAAGGCCTGCTGCCCGGCTACGAAGATGGCTGGACCGGCGTCCACGAGTGGGAA
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Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit II
MNHEVVEKNIGLMLLLMILCVSVGGLTQIVPLFFEDVTNTPVEGMKPYTALQLEGRDIYIREGCVQCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGSRYSDDWHRAHLYNPRNVVPESKMPAYPWLVSNPVDSSHTEKKLEVMRTLGVPYTDDDIANAKQSVQGKTEMDALVAYLQVLGTAIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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