Pseudomonas taetrolens DSM 21104, TU78_RS16255 (zipA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 6_420177_45.4403, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCAATCCGGCACCGTTCTGCATGCTCGATGAGGTTGATGCGCCGCTGGATGACGCGAACGTGGGTCGCTACGCACGCCTGGTGAAGGAGATGTCGCAGAC GGTGCAATTCATCTACATCACTCACAACAAAATCGCCATGGAGATGGCGGATCAGTTGATGGGCGTGACGATGCATGAGCCGGGTTGTTCGCGTCTGGTG GCGGTTGATGTCGAGGAGGCAATGGCAATGGTCGACGCTTGAGCTATAAGCAAGTAGGGCCAAAATTTTCTTCTTGTCAGAAAATTCCTAAGGATTTGAC TGATATGACTTGTAGGTCTGCGGCTACATGGGCTTAGCTCAATGCGACAGACGGTGTAAAGTTATCTTTGGTCGTGTTAATTTAACGTCTAATTTTTTTG TACGTGGGTAAAACGCCATTCAGAACATAGAGTTGGCGCCACGTTTTAAAGGGCTTTAGGCTCTTCTTTATAGAATCATTTTTTAGGGGCACGGGATTAC
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| DNA Sequence for Gene |
>TU78_RS16255
|zipA
ATGGAAATCGGTCTGCGCGAGTGGCTGATAGTCATCGGCATAGTGGTCATCGCCGGTATTCTTTTTGATGGCTGGCGCCGTATGCGTGGCGGCAAGGGCA AGCTCAAGTTTCGCCTTGATCGCAGCTTCTCCAACGCCCCTGACGAGGAAGAAACCAGCCCTGAGTTGCTGGGTCCTTCACGTGTCCTGGACACGCCTAA CCACAAAGAGCCCCAGCTCGATGAGCACGATTTGCCATCAGTGAGCATGTCGGCGCGTGACAAGGGTTCCAAGCGCAGCAAGCGTGGCGGTGAGCCAAGC CAGGGCGACCTGAACCTGGACCTCGACCTGGATGGCGGCCCGAGCCTGAGCGCCCGTGATGATGATTTTCCGGACGAAACCCGCTCACGTGGGCGTTCAG TGCCAAACGTGTCCGCGGTTGAGGAAAAAGAGCAGCCTCAGCAGGCCGCTCAGGAAGTCCTGGTAATCAGCGTGATCAGCCGCGATCCGGCCGGATTCAA AGGCCCGGCGCTGCTGCAGAACATCCTTGAAAGCGGTCTGCGTTTTGGCGAGATGGATATTTTCCATCGCCACGAAAGCATGGCCGGCAATGGCGAAGTA CTGTTCTCCATGGCCAACGCCGTCAAGCCGGGCGTATTTGATCTGGACGACATTGACCTGTTCTCCACACCAGCTGTGAGCTTCTTCCTCGGTTTGCCTG GTCCGCGCCATCCAAAGCAGGCTTTCGATGTGATGGTTGCCGCAGCACGCAAACTGTCCCAGGAGCTTAACGGTGAGCTCAAGGATGATCAGCGCAGTGT TTTGACCGCGCAGACCATCGAGCATTACCGTCAGCGCATTGTTGAGTTCGAGCGTCGGGCCTTGACCCAAAAACGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCCCCTGGGGGCGGCAGGCTTGCCCCCGGTGCGGAGCAAAATGATTAACACAGGAGCAGCCTCGGCTGCTCTTTTGCTTTGTGAGAGAACACCCCATG ACCGCCGCCAACACCCGCATTCTAGAGCTGCGCGCTGAACTGGATCAGCATAACTATCGTTATCACGTGCTCGACGAGCCGAGCATTCCGGACGCCGAGT ACGATCGCCTGTTCCGTGAGCTGAAAGCGCTTGAGGCTGAGCATCCGGAGCTGGTCACGGCGGATTCGCCCACCCAGCGCGTCGGCAGTACGGCGCTTTC AGCTTTTACTCAGGTGCGTCATGAAGTGCCCATGCTAAGCCTGGGCAACGCCTTCGACGACACCGATATGCGTGAGTTCGACCGGCGTGTCAGCGAAGGT CTGGACCTGCCGGCAGGTGATCTGTTCGGTGGCGGTGCCGAGGTTGAGTACAGTTGCGAGCCCAAGCTGGACGGGTTGGCGGTCAGTTTGCTGTATCAGG
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| Amino Acid Sequence |
>cell division protein ZipA
MEIGLREWLIVIGIVVIAGILFDGWRRMRGGKGKLKFRLDRSFSNAPDEEETSPELLGPSRVLDTPNHKEPQLDEHDLPSVSMSARDKGSKRSKRGGEPS QGDLNLDLDLDGGPSLSARDDDFPDETRSRGRSVPNVSAVEEKEQPQQAAQEVLVISVISRDPAGFKGPALLQNILESGLRFGEMDIFHRHESMAGNGEV LFSMANAVKPGVFDLDDIDLFSTPAVSFFLGLPGPRHPKQAFDVMVAAARKLSQELNGELKDDQRSVLTAQTIEHYRQRIVEFERRALTQKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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