Pseudomonas taetrolens DSM 21104, TU78_RS13120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 5_452504_44.2116, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTGAATCTGCGCACCGATGGATCCCTTGACGAAAATACCCGCACCGTCGTTGTCCGATTCGTGCTGGACATGAAAAACGGGAATGCCTGTACGCCGGGC ATCCGTCATGACCCGGCCCGCCTTCGCAACAGCGGCCTCAATACCGGTTAACGGCAGTTTGCCAGTGGGCAGGTACTCGTTTTGCAGATCAACAACAATA AGACCACGTTTCATAAACACTCTCCTGACTCTTGGTTAAGGTGAGGGGGCGGCTGCAGGTCATGGCCTGAGCAGCGCTGCAGCCGCACTGTCACCTGATT AAAACGTCAGTGTTGCACCGTCTTCCGGTATCTCGACGCGAGCCTCGATAGGCCAGCGGGAGTGTGCGGAATTTCATTGGATAAACCTTGTTGATTCTTC GTTAGCCCTATTCTTGCCCGGCACCTGAATGGCCAACAGTGGCCCGAATGACATATTTCGATATAATCGGGCCATTGCTCATACGCACAGAGGCAGGCCA
|
|
| DNA Sequence for Gene |
>TU78_RS13120
ATGCCCTCCATACGTGTTGCTGTTCTGGCCTTCAACGGCGTGAGCATGTTTCATCTTTCTGTCCCCGGGATTGTGTTGGGCGCCGTGGAGGCTACAACCG GTGAGCCTGCGTACCAGGTCAGCTACTGTGCCGAAGTGCCGGGTATGGTTGAGAGCGACCAGGGGATCGGCATCGCTGTTTCACACGGGCTGGAGCTGAT GCGGGCATCTGACGTGATCATCATTCCGGCCTGGAGCGATCCCGCGGACGTCGCGTCAGCGCCGCTTGTGCAAGCGCTGCAACTCGCCAACAGCGAAGGC AAACTGATCGTGGGTTTGTGCCTGGGTGCCTTCGTACTGGGGGATGCCGGCCTGCTTGATGACAAAGAAGCCACAACGCACTGGATGGCCCGCGACACAT TCGCGCGACGTTTCCCGCAGGCCCGATTTCGTCCCGAAGTACTCTACGTCAGTGCCGACAACATCGTGACCTCGGCGGGAACCATGGCCGCGATTGACTG CTGCTTGCATCTGGTCCGTCAGCGCAACGGCGCCGATGCGGCGAACCGCGCCGCAAAAATGCTGGTGACCCCGCCCCACAGGCTGGGTGGCCAGGCACAG TACGTAGAGCACCTGGTACCCCAGCTTGCGACCGAGACCCATTTGTCCGATGTGTTGGTGTGGGCAAGAGCCAACCTGGCAAGCCAGCTGTCGCTTGATG TCCTTGCCGAAAGGGCAAAGATGAGTCGACGAACATTTACTCGCCGCTTCAAGGAGGCCACGGGCAGTACCGTGTCCAGCTGGTTGAACGCTGAACGGGT TGCCAGAGCGCAACAGCTGCTGGAAACCACCGACTTGCCCATCGAATGCATCGCGGGCGAATCAGGCTTCGGCACGCCATTATCGTTAAGGCAACAGTTT GGCGTTCACCTCGGTACATCACCTTCTGATTATCGCCGGATGTTTTTTCGTGACATGAATCCCGGGACCCGGGCGAAAGCCCCTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCCGGTCCAGCGCATTGTCTGCAGCGTGATATGGGGATGACTCTCTAACGGCTCCCATTCATCCAGAAAAACAAAACCTTGTTTCAGGTAGAAGTGTG CGGCCCTTGCATTGTCAGGGCAGACGTCGAGAAAAACGCGATTAAGCCCTTTTTCCAACGCCCGCGCTTTCACGGCGTCTACCAGCTGTGTTGCCGCGCC AGAGCCCCGTGCAGCGGGCTCAACCCACATGCCGATCAAGTTATAGCGGTTCGTACTGCTGACAGCGGCACCGACCATGCCGACGGGCCGGTCGCTCTCG AAGGCAAGCCAGAATTCCGTTCCGCTGGATGAGGCTCTTTGTTGCCACTGCTGGTCAGCGTAGCGGGCGGCGGTTTCATAACTCACGCCAAATGCCATTG GGGCGTCCAGAAGTGCAGCGAGCCGGATTTGCTTGAGCCGCTTCCAGTCAGTTGTTTGCGTCGATCGAACGTCCATGATCCTCCTTGGTCAGTTGGGTGA
|
|
| Amino Acid Sequence |
>AraC family transcriptional regulator
MPSIRVAVLAFNGVSMFHLSVPGIVLGAVEATTGEPAYQVSYCAEVPGMVESDQGIGIAVSHGLELMRASDVIIIPAWSDPADVASAPLVQALQLANSEG KLIVGLCLGAFVLGDAGLLDDKEATTHWMARDTFARRFPQARFRPEVLYVSADNIVTSAGTMAAIDCCLHLVRQRNGADAANRAAKMLVTPPHRLGGQAQ YVEHLVPQLATETHLSDVLVWARANLASQLSLDVLAERAKMSRRTFTRRFKEATGSTVSSWLNAERVARAQQLLETTDLPIECIAGESGFGTPLSLRQQF GVHLGTSPSDYRRMFFRDMNPGTRAKAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|