Pseudomonas taetrolens DSM 21104, TU78_RS12940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas taetrolens strain DSM 21104 5_452504_44.2116, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGCCAGTTTTCCGGGCGCATCTGGATCGGATTCCCGATGAAACGACGATCCTCAATTTCCACCGTCTGTTGGAAAAACATGAGCTGGCCGGCGGAGTT TTGCAGGTCATCAACGGCTATTTGGGTAACCGTGGCTTGATACTGCGCCAAGGCACCGTGGTCGATGTGACGCCTTGGGCACGGGCTGGTCAGTAGGATG ATTTCATTATTACCTGTCCAGACGTGCCTAAATTTGGATTTTTGGCCATGGTTTTGTGAAAAATGCTTTTTTACTGATCCAGATCAATTTTCCTGGTCGT TCAATCAGGCTTAATCGTTTCAGCACTTTTGAAAGTCAGCGAGTTATAGAAGGGTCTTGATGGATGTCCATGATAAGTACCCACATAAAAATGGAATTTA TTTTAATCCGATGCTCATAAAAATTGCGCTTAAAAGCAATATCTCCCTTTACTCATGGCGAGTTAAGGAGTTCATCTAAACGTTACATAGGATCTACATC
DNA Sequence for Gene
>TU78_RS12940
ATGAAGCGGACTGTTCTCGTTCTTGCTACTTTCTTCCCAGTAATGGCTTTCGCCGCCTCTCAAAACACCATCACCTTTACAGGTCAGGTTTCAGACCAAA CCTGCGAAGTATCCGTTAATGGTAACGCTGCCAATCCGGTCATTCTGATGCCTACCGTCAGCGCCGCCGCGTTGAACGCCGTCGGCAGTACGGCAGGAGA AACCCCGTTCACTATCAGCGTCAGCAACTGTGCTGCGCCCACCTCGACTTTGGCGATCAAAACCGCATTCCTGGGTAATAACGTAACTAGCGCAGGCAAC CTCGGGAATGCGGGTACTGCCACGAGTGTACAAGTTCAACTGCTCGATGCTGCTGGTGGTGCCCCAGTTGTACTCAACGGTACTACATCTGTTGCCGGTC TAAGCCTGGACTCTGGCGCCACCAGTGCCAGCCACGACTTCGCCGTTCGCTACATCAGCGAAGCGGGTGCAGCAACCGCCGGTACCGTCTCCGCTACCGC TCAGTACGCTTTGGATTACCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCAATAGCTATCCTGCCGGGCGATACGCCCGGTAGTTCCCCCTCGCAACTTCCATACCCTCTACACATTGTGTGCGGATACCTATGTCTCGCCTTAAAA AAGTCACCCTGGCTCTAGCCCTGACTGTCTGTAGCCTTTTGGCCCATAACGCGATAGCCAGCGTTGTAATGACCGGTACCCGTGTCATCTACCCAGCTCA AGCCCAAGAGAAAATGGTGCAACTGACCAATCAGGATACCCATCCGTACCTGGTTCAGATGTGGGTTGACAGCGACCCCCTCAACACCACGGCGCAATCA GCCAGCGCGCCGTTTATTGCAAATCCTCAGGTTTTTCGCGTAAACCCCAATTCCGGGCAGGTGGTACGCCTGGTATTTACCGGAAAAGACTTGCCGAAAG ACCGAGAAACTCTGTTTTACCTCAGCTTTTTGCAGATGCCTGCTATAAAAGCCAGCGAGCTGCAAGCCAACAAATTACTGCTCAGCGTCAATAGCCGAAT
Amino Acid Sequence
>fimbrial protein
MKRTVLVLATFFPVMAFAASQNTITFTGQVSDQTCEVSVNGNAANPVILMPTVSAAALNAVGSTAGETPFTISVSNCAAPTSTLAIKTAFLGNNVTSAGN LGNAGTATSVQVQLLDAAGGAPVVLNGTTSVAGLSLDSGATSASHDFAVRYISEAGAATAGTVSATAQYALDYL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site