Pseudomonas taetrolens DSM 21104, TU78_RS11785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF47781 | RuvA domain 2-like | IPR010994 | RuvA domain 2-like | 17 | 90 | 6.23E-11 |
| PANTHER | PTHR30471 | DNA REPAIR PROTEIN RADC | IPR001405 | Uncharacterised protein family UPF0758 | 1 | 224 | 3.9E-79 |
| NCBIfam | TIGR00608 | JCVI: DNA repair protein RadC | IPR001405 | Uncharacterised protein family UPF0758 | 11 | 224 | 1.7E-70 |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | - | - | 100 | 223 | 1.7E-40 |
| FunFam | G3DSA:3.40.140.10:FF:000032 | DNA repair protein RadC | - | - | 101 | 224 | 2.8E-60 |
| Pfam | PF04002 | RadC-like JAB domain | IPR025657 | RadC-like JAB domain | 104 | 222 | 6.3E-44 |
| CDD | cd08071 | MPN_DUF2466 | IPR025657 | RadC-like JAB domain | 107 | 218 | 9.22469E-58 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | - | - | 107 | 192 | 1.83E-6 |
| Pfam | PF20582 | UPF0758 N-terminal | IPR046778 | UPF0758, N-terminal | 3 | 79 | 1.2E-28 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.