Pseudomonas taetrolens DSM 21104, TU78_RS10710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1083 1214 4.5E-32
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 15 134 2.5E-7
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1460 1474 6.5E-9
Coils Coil Coil - - 1269 1289 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1372 1553 2.05E-33
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 628 749 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 1060 1082 -
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1629 1690 1.1E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1086 1186 1.6E-15
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1419 1554 3.2E-12
Gene3D G3DSA:1.10.287.560 - IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily 1232 1296 3.3E-5
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1415 1556 6.6E-21
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 98 1.0E-6
Coils Coil Coil - - 773 793 -
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1721 1834 1.4E-36
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 626 740 3.66E-23
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1371 1555 4.3E-58
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1561 1693 1.6E-22
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 767 866 2.3E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1085 1203 4.84E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 129 8.37E-17
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 908 1033 8.5E-13
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1556 1689 4.19E-24
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 626 727 0.0021
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 628 719 2.6E-12
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 866 1.00542E-7
Gene3D G3DSA:3.40.50.2300 - - - 1723 1841 2.7E-39
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 765 861 0.055
Pfam PF02895 Signal transducing histidine kinase, homodimeric domain IPR004105 Histidine kinase CheA-like, homodimeric domain 1233 1292 8.5E-6
SMART SM00260 chew_2 IPR002545 CheW-like domain 1548 1692 5.6E-27
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1085 1182 7.41168E-15
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1516 1534 6.5E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 759 892 9.7E-15
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1231 1370 5.5E-12
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1369 1554 1.6E-49
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 765 885 1.07E-16
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1720 1837 1.57E-36
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1540 1553 6.5E-9
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 906 1028 7.95E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 626 753 9.7E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1723 1834 1.5E-27
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1723 1834 2.98457E-30
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 431 545 3.92E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1084 1181 3.3E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.