Pseudomonas taetrolens DSM 21104, TU78_RS08030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 3_672223_44.3836, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACTCTGCAAGCCTGCCGATCCTGATGTTGACTGCACGCGACGATAGTCATGATCAGGTGCTGGGGCTAGAGATGGGGGCCGATGATTATGTGACAAAA CCTTGCGATCCACGGGTGCTGTTAGCCCGCGTTCGCACCTTGTTGCGCCGCAGCAGCCTCAGTGAACCGCAAGTGGCCAGCGACAGGATCCTGATCGGCA ACCTGTGCATCGACCTGTCGGAACGTACCGTGACCTGGCGCGGACAAGCCATCGAATTGTCCAGCGGTGAGTACAACCTGCTGGTGGTACTGGCCCGGCA TGCCGGTGAAGTGTTGAGCCGCGATCAGATCCTGCAGCGATTGCGCGGTATTGAGTTCAATGGTACCGACCGCTCGGTAGACGTGGCGATCTCCAAGTTG CGGCGCAAATTCGATGACTGCGCCGGCGAAGCGCGCAAGATCAAGACCGTGTGGGGCAAGGGTTACCTGTTCAGTCGCTCGGAATGGGAATGCTAGCCCC
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| DNA Sequence for Gene |
>TU78_RS08030
ATGTTCAAGCTACTGATTCGACTGTATCTGGTCACGATAGTCACCTTTGGTGCCGCCATTTATGTGGTTCCCGAGTTGATTGTGGCCCTGTTCCACGACC GCTTCATGAGCTACAACGTCGACATGTCCCGCGGGATGCAGACCCTGCTGGTGAAACAGTTCCAGCCGTTGCCGGCCGAGCAGTGGCCCGGCCTTGCGCG GGATCTCGACGCTCAGTTCTCGCCGTTGCGGGTTAATTTGTTGCCCATTGCCGATCCCAGGTTCACGGCCGATGAGCAGCGCCAGTTACAGCAAGGGCAG GGTGTATTACGCATCGGCGAATGGGGCTGGCGGACGCGGGTGGTATCGCCGCTTGACGGGAATCAGGCCATTGAGCTGGTCATGCCGCCTGACCCGTTCG ACATGAACGTGCTGTACTGGAGTATCAACGTACTGATCGGTGCAGCCTTGCTGGGTGGTCTGTTGCTGTGGTTGCGCCCGCACTGGCGGGATCTGGAGCG ACTCAAGCGCACGGCCGAACGGATCGGGCATGGAGAGCTGAGTGTGCGGACCCAGATACCGCGCAGTTCCAACATCCACGGGCTGGCTACGGTGTTTGAC ACCATGGCGCAAGACGTTGAAAACCTGCTCAATCAGCAGCGTGACTTGCTCAATGCGGTATCCCACGAACTGCGTACCCCTCTGACCCGACTGGATTTTG GCCTGGCACTGGTCATGTGCGACGACTTGCCCGAGGCCAGTCGTGAGCGCTTGCAGGTGCTGGTCGGACATATTCGAGAACTGGATGAACTGGTGCTTGA GTTGCTTTCGTTCAGTCGCCTGCAAAACCCGGCGTTGGTTCCTGATCGGGTAGAGGTGGCACTGGACGAATTTGTCGACAGTATCCTCGGCAGTTTTGAT GAAGAGCTCGAAGCCCCGGAGATCGTGCTCGACGTGCGACTGGAGGGCGCCCAGCAACGTTTTGCCCTGGACCCGCGGCTGACTGCCCGCGCCCTGCAAA ACTTGCTGCGCAATGCCATGCGTTACTGCGAGCGGCGCATCCAGGTGGAAGTCAAGGTCACCGCGCAGGGGTGTGAGGTGTGCGTGGATGACGATGGTAT CGGCATTCCCGAGCAAGAGCGCGAGCGCGTCTTCGAGCCGTTCTATCGGCTGGACCGCAGTCGCGACCGGGCGACAGGAGGCTTTGGGCTGGGACTGGCT ATCAGTCGACGCGCCCTGGAAGCCCAGGGCGGCACCTTGAATATTGAGCAGTCACCTTTGGGCGGTGCTCGTTTCAGACTGTGGTTACCGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCACATCGAGCGGCGTTGACGGCTTACATGCTTCAAGCCTTCGATGACCAGCACGCCAACGGCGAGCCAGATCGGGCCGTAGGTCAGCCACTGGCCTTC TTCGAGGCTGTCGCCCAGTAACAGGGCGACGGCTACCAACAGCACGGGCTCCACGTAGCTGAGCAGACCGAACAGGCTGAACGGCAGCAGGCGACTGGCC AGGATATAGGCAAAGCCCGCAGCCGCACTGATGATGCCCATCAATGGTACCAGCGCGTACAAAGCTTCGCGCTGTTCACCCAGGTTGTTGTGACCGCCTG CCAGTACGAACAGCAAGGCCACTGGCACCATCAACAGCATGTCCAGCCACAGGCCGCCCAGATTGTCGATGCCGATCTTTTTGCGCAGTACGAAGTACAT TGGATAACCAATGGCGACGACCAGCGTGGTCCAGGAGAAACCGCCTGTGCGATACAGTTCGTTTGCTACACCGATGACGGCGAGTGCGGTGGCTATTTTC
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| Amino Acid Sequence |
>histidine kinase
MFKLLIRLYLVTIVTFGAAIYVVPELIVALFHDRFMSYNVDMSRGMQTLLVKQFQPLPAEQWPGLARDLDAQFSPLRVNLLPIADPRFTADEQRQLQQGQ GVLRIGEWGWRTRVVSPLDGNQAIELVMPPDPFDMNVLYWSINVLIGAALLGGLLLWLRPHWRDLERLKRTAERIGHGELSVRTQIPRSSNIHGLATVFD TMAQDVENLLNQQRDLLNAVSHELRTPLTRLDFGLALVMCDDLPEASRERLQVLVGHIRELDELVLELLSFSRLQNPALVPDRVEVALDEFVDSILGSFD EELEAPEIVLDVRLEGAQQRFALDPRLTARALQNLLRNAMRYCERRIQVEVKVTAQGCEVCVDDDGIGIPEQERERVFEPFYRLDRSRDRATGGFGLGLA ISRRALEAQGGTLNIEQSPLGGARFRLWLPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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