Pseudomonas taetrolens DSM 21104, TU78_RS07565
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 3_672223_44.3836, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCAGAAGCTGAAAGGTTTGCTTGGCGTGTTGCGTGACTCAATCGCTCAGCACCATTCGGCGCTGATTGAAGCCATTGAAGCGGGTGACCATACGGAAGT CAGTCATCTGTCCCATCGCCTCGCCGGGAGCAGCGACTCGCTGGGGTTCAGCGCCCTGGCTGAAGCCTTGCGAGGTTTTGAGTCCGCAGCGCTGATCAAC GATAGCGCTGCAATACAGGCGTTATTACCGCACTTCCAGCGCGTATTGCAGCGTTCGCGGGCGGTGCTGGAAGACACGCTGAGCAGCTGACATACAACTT TGTTACGACTTCGTACATCTTTGATCCTGGTGTACAACGCGAACTTACATGGCTTTCCAATAATCGGGATAACCGCGCTGGCCGCGGTCTTCGAAGCTTA TTGGAGATAATAATAATGAACTGCCGTAAAGCTGATCTTTCCCCGCGTGATGACATCCTGTTATCCGTCCTGCACCTCTCCCGATACTAAGAGGTGCGCC
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| DNA Sequence for Gene |
>TU78_RS07565
ATGAGCGAATCAATCGAACGTAAAGGCATACACCTCACCCGCGCCTTGAAAAGCCGGCACATTTTCATGCTGTCGCTGGGCGGGGTTATCGGCACCGGTC TGTTCATGGGATCGGGGGTCACCATCAACCAGGGAGGGCCTTTGGGGGCAGTTTTGGCCTATCTGGTGGCCGGTTTCCTGATGTACCTGGTGATGGTCTG TCTGGGCGAGCTGTCCGTGGAAATGCCGGTGTCCGGCTCGTTCCAGACGCATGCAACCAAATACATCGGGCCTGCCACCGGCTTTATGATCGGCTGGGTT TACTGGATGAGCTGGGCGACCACTGTCGGCCTTGAGTTCACCGCCGCCGGCATGTTGATGGTGCGCTGGTTCCCGAGTGTCCCGATCTGGTACTGGTCAG CCCTCTTTGTGGTGGTGCTGTTTGGTTTGAACGCCTTGGCAACCCGGGCCTTCGGTGAGGCGGAGTACTGGTTTTCCGGGATCAAGGTGGCGGCGATCCT GGGCTTTATCATCGTCGGTGTACTGGTGATCTTCGGTGCATTGCCGCTGGCCAATGGCGATCCTGCCCCCATGATGAGCAACCTGATCGGCGACTCCCTG TTTCCCAACGGCCTGTCGGCAGTGTTCGCGATGATGATGACCGTCGTGTATGCCTTTCAGGGCTGCGAAATCATGGGCGTGGCGGCTGGCGAAACCGATC AGCCGGAGAAGAGCATCCCCAAGGCGGTGCGCAACGTGGTGTTCCGCGTATTGATCTTCTATGTGCTGGCGATTGTGGTGCTGTCCGCCATCGTGCCCTG GGAGCAGGCCGGGTTGATGGAAAGCCCGTTTGTGCAGATGTTTGACATGGTCGGCATTCCTTATGCCGCTGACCTGATGAACTTCGTGATCCTGACGGCG ATTCTCTCGGTCGGTAACTCGGGTCTATACGCCTCTACGCGAATCCTGTGGGCGATGTCGAAAACCGGGATGGCGCCGAAAGTGCTGTCGCCACTGAGCT CTCGCGGTGTGCCCTTGCGCGCCTTGAGCATCACGCTGTGCTTTGCCCTGGTGTCGCTGATGACCAGCTTCATCGCCGCTGACACCCTGTTTATGGTGTT AATGGCCGTGAGCGGCATGTCCGGCACTGTGACCTGGATTGTGATTGCCCTGGCGCAGTACAAATTCCGTCGGGCCTACATCAAGGCTGGCGGCAAGGTC AGCGATCTCAAGTACCGTGCCCCGTGGTACCCGTTCTTGCCGCTGCTATGCATCGCCATGTGCTGCTCACTCTTCGTGTTTCTGGCCCTGGATGAGACCC AGCGTCCGTCGCTGTATTGGGGCTTTGGTTTTATTGCCATTTGCTACGGCGCTTACTTCCTGACCCATCGCAAACGTCAGGCGGATCTGGCGCAGGCGCT GCAGACCGTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTTCACCCAAAGCAGGCGCGGGCGGGTTCGCGACACGCACATATCGCGAACTCGCCCGTCACCACTTTGAGTCAATACGCTTCAGCGACTTTTTCCGG ACAAACAAACACGCTCGTAGTCAGTTGTTCAAAGATGTAACAGCGCTTCAGGGAATGAAGCGCGCCATTGTTTTTTCTTCATACAAATCAATCAATTAGA AAAAGTTTAACGCTGTTACAGGCGATCGGCCCCAGGATTGCCGCCTTACTGAACGGTCGTTTAGTATGGCGCCATGTCGGTCCCACCTCATGACAAACAC AACAATCAGAGGACTCATATGACTACTCAAATGTCTCTGCTCAGCCAGGTTGAAGCAGGCGTTGCATGGATCACGCTTAACCGCGTGCCGCAGCGTAATG CGCTGGATATCCCAACCCTGAAAAACCTTCACGCGTTGCTCGATCAGTTCAATCTCGATCCTTCTGTGCGCGCTGTGGTTTTGACTGGGTCCGGTCGCAG
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| Amino Acid Sequence |
>amino acid transporter
MSESIERKGIHLTRALKSRHIFMLSLGGVIGTGLFMGSGVTINQGGPLGAVLAYLVAGFLMYLVMVCLGELSVEMPVSGSFQTHATKYIGPATGFMIGWV YWMSWATTVGLEFTAAGMLMVRWFPSVPIWYWSALFVVVLFGLNALATRAFGEAEYWFSGIKVAAILGFIIVGVLVIFGALPLANGDPAPMMSNLIGDSL FPNGLSAVFAMMMTVVYAFQGCEIMGVAAGETDQPEKSIPKAVRNVVFRVLIFYVLAIVVLSAIVPWEQAGLMESPFVQMFDMVGIPYAADLMNFVILTA ILSVGNSGLYASTRILWAMSKTGMAPKVLSPLSSRGVPLRALSITLCFALVSLMTSFIAADTLFMVLMAVSGMSGTVTWIVIALAQYKFRRAYIKAGGKV SDLKYRAPWYPFLPLLCIAMCCSLFVFLALDETQRPSLYWGFGFIAICYGAYFLTHRKRQADLAQALQTV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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