Pseudomonas taetrolens DSM 21104, TU78_RS06845
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 2_681804_45.4493, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAATTCAAGGTGATTCTACTGAGCGAAGTGCCGTGCCTGAGTGCCGAGCAACGGGAAGGCAAGATTGCCCGTGGTACGGAAGATGGCGCGGTCAAGGTC GAAGCCGGAGACCGTGAACTGCCGCAGCTGTCCAGGTTCGACGACAGTGTGAGGCGTTTTATTGCCCTGATCGACGAATGTTACGACCGCAAAGTGCCGG TGTGCGTTGAGGCCCGGGTACCGATGGATGAGCTCTATACCCAGGGATACCTGGCGTTTGCCTTCCGCCGCACCCTGAGCCGCCTGCAGGAAATGCAACT GCAACGGTTTGGCCTTTAACCGCTGCCTAATGCGAAGTCGCAGCCTGCGACAAAGGTCATGTGTAGCAGCGGTCGAGTAGAGCGAGCCCGCGTCCGGCGG CGCAGCCGTCGTCAGCCCCGGGCAGGTGGCTTAAATTTAAGTGTCGAGCAAACGTTCTAGCTTGGATAACGCCTGCATTCAGGCTGAGACAGGTAGGGCA
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| DNA Sequence for Gene |
>TU78_RS06845
ATGACGATTTCTCGACGAGGGTTCATCGCAGGTTTGGCGATCACCGGCGCGGCAGCGCCAGCAGCGTTCTACGCGCACCGAGCGTTAACGCAAGCAGACG AACCGGTCACGCCCGGTGAAGCGACGGTCGAGCTGGCCGACACCGCCGGCCAGCAATTGGCGGATCAGCTACGTGGGCGCTGGCGTATCAAGTTTAATGG CCGCGAGGCCGGACTTGAGGGCTTGCCCGCGGATGATCTGGAGCTATGGCTGGACATCGCTCCCCGCGGACGCGGTGTCCGCGGTTATCTGGATACCGCA GCGGTGTTGCAGGGAGAGACCGCACCGCACTACCGCATCCTCGGCGATCTGGTAGCCCCCGATGCCAAACGAATGCACTGGCGCTTGACTCGCAGCGATA CGCTCAACGGCCAGCCAGATTACGAATTCAGTTTTAGCCTCGACGAAGTCTGGGGCACCTACGGCAACGCGGGCAGCGGCACCTTGAGCGGGCGCGTGCA ACGCCTGGATCGCCCGCTGGGGCTGCCTGAGCAGGACAACCGCTTCGTCGCCCTCAAGCACACCTTTCCCGAAGCCCGTGAACGTATTGCCCTGGAGGCG CCGCTATTGGCCTGGCTGGTGGCGCCCGAACACCGGCTGTTTCATCAGCTCTGGCATGCTTCCCGCGATACTTGGCACGAACTGTCGGAAGACAAACGCA ATGCCTTGCGCGGTATTGGCTGGCAACCCGGTCAACGCGGCAAAGAGCGCGATGCCCGTGGCCCGCGCAAGGATCGTAATGGCTCGGGTGTGGACTTCTT TTTTATGCACCGACACATGTTGCGCACGGCGCGTTCCCTGCAGGACCTGCCTGCGTGGGCATCTTTCCCGTTGCCTCAACCCGAGCTTGAACGCGACCGT GCAGGTTTTGGCCGCTACTTTGACAACCATGATGGCAGCGCCTTGCCGCCGACCTGGCTGGCAGAGGGGGATGAGGCCTATACCCAATGGCTCAGCGATA TCAAACAGCCCGAAACCTTCCACGCTAACTTTGAGGTCTGGGAATCGCGTTATCGCGACCCTCGCTACCTGTCGACCCTGACACTCGGCCAGTTTGGTTC AGAGGTGGAACTGGGCCTGCATGACTGGCTGCACATGCGCTGGGCCTCTGTGCCCCGCGATCCCTCCAACGGTGCGCCGGTGCCCATGGCCCGCGACCCG GCTGATTTTGCTGCGCGCTGGTTTGTACCTGAAAACGATTTTTTGGGCGATCCGTTCTCTTCCCATGTCAATCCGGTGTTCTGGAGTTTTCACGGCTGGA TTGATGATCGCCTGGAGGACTGGTTCCGTGCCCACGAGCGCTTTCATCCCGGTGAGTTGCAGCGTCAGGAGGTCAATGGCGTACCGTGGTTTGCGCCGGG CCGTTGGGTGGAAGTGGATGATCCGTGGTTGGGGCCCACTACCCATGGCTGCAGCACGGTGCCGGGTCTGGCCGCAGGCAAAACCGTGGAAATGGACCCG GAAACCATGAAGCTGGCATTGCGCATCACGTTTGGCGAGGAGAGCACGCTCACTCACCTGTTGCGTCGGGTGCCGCGTCGGCCCTGGTATGCACGGCACC TGTCGCTCAAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGCCTTGGCGTTCAGGCCGGCTCGGGTGAAGCCCGGGGCGAATGAACACCGGGTTTACTGTGAGTGCCAGCCACCCCCCAGCGCCTTGTACAGCGCGA TGCTGGCTTGCAGTCGCGCCATGCGCAGTTGCACCTGTTGATCCTGAGCCTGATACAGCGTGCGCTGGGTTTCCAGTACCGTCAGCAGCATTTCCGCACC CGCCTGATAGCGGTTCTCGGCCATGTCGAAAGCTTGCCGGGCCTGTTTGAGTTCCTCGTCCTGCCAGTAACGCTGTTGATCCAGCCCGTGGGCACTGTTG AGCGCTTTTTCGACGTCGGCGAAGGCATTGATGATGCTTCCCCGATAGGTTTGCAGCAGCTCTTGCTGGCGGGCTGTGGCTTTGTCGCGTTCGGCGCTGA GGCGGCCGTTATTGAAAATGGGGGCCGCGAGCCCTGCGGTGAGGGTGTAGAACGGGCTGCGCAAAATATCGCTGAAGGAGTCCGCCCCGGAGCCCAGGCT
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| Amino Acid Sequence |
>PvdJ/PvdD/PvdP-like protein
MTISRRGFIAGLAITGAAAPAAFYAHRALTQADEPVTPGEATVELADTAGQQLADQLRGRWRIKFNGREAGLEGLPADDLELWLDIAPRGRGVRGYLDTA AVLQGETAPHYRILGDLVAPDAKRMHWRLTRSDTLNGQPDYEFSFSLDEVWGTYGNAGSGTLSGRVQRLDRPLGLPEQDNRFVALKHTFPEARERIALEA PLLAWLVAPEHRLFHQLWHASRDTWHELSEDKRNALRGIGWQPGQRGKERDARGPRKDRNGSGVDFFFMHRHMLRTARSLQDLPAWASFPLPQPELERDR AGFGRYFDNHDGSALPPTWLAEGDEAYTQWLSDIKQPETFHANFEVWESRYRDPRYLSTLTLGQFGSEVELGLHDWLHMRWASVPRDPSNGAPVPMARDP ADFAARWFVPENDFLGDPFSSHVNPVFWSFHGWIDDRLEDWFRAHERFHPGELQRQEVNGVPWFAPGRWVEVDDPWLGPTTHGCSTVPGLAAGKTVEMDP ETMKLALRITFGEESTLTHLLRRVPRRPWYARHLSLKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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