Pseudomonas taetrolens DSM 21104, TU78_RS05775
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 2_681804_45.4493, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGAGCCTGATGCCCGGTTTCGACCGGGCAGCGCCTATCTCCCCCTTCAACGCCCAGCACCGACCACAATCAAGCCGCGTCATTCGACATTCCTGATCG GCTGCGAAAAGACTTGCTTTCGCCCAAAGCCGCGCCCAGCCTAAGCCATACACACCCCTCGCAAGATTTAGGGCATTTCGTCGCACGCCACGAAAAAAAA CTGGCTGAAATACCCTGTGCAAAAGCCGTATACTGGCGCCTTCAAACGAGCTTGTTTTATCCCTTTAAAGGGCTATAACCCCACGCTGTCCAGCCCTCCA GGGCAAGGTTGAGATGCACAGACCGATGCATCCCCTCAGCAGCGCTAATGGGCAAGCCAATCAACACATTCATGTTTTTGCGTGAGCACACCGCTACTGC AAGCAACATTTCTTAGATCCAAGTGGCCTTATGGCCGTGTGACAACCAATCATCAGTGTTACCACACGGGCACAGGCCCTCACGCAGGAGACGACACGTC
|
|
| DNA Sequence for Gene |
>TU78_RS05775
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACGAAGGCGAAGTCGCCGTTAAAGGCGCCAACGCAGGCCACGCAACTGAAGCCAACATGGACCGCCTCG ACGCCGCTGGCGGCGTAGCAGCCCAGGAAGCCCGTGCCGTAACGGCCGCCGACTCGGCAGCGATCATTCGCGCCAAGGCTGCACTGGACAACCTCGACGT GGCAGAAGGCCTGGCCGAACTCGAAGGCGCCAGCGCCCGGGTTGCCGTTGACGAAAAAATGATGATCAACTGCCGCGCCGACCTTAACCAGCTCGTACCG TTCAAGTACGACTGGGCCTGGCAGAAGTATCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAA ACCCGGAAGGCCTGACCGACGACGAGCGCCGCATCGTGATGCGCAACCTGGGCTTCTTCTCCACAGCCGACTCCCTGGTTGCCAACAACCTGGTGCTGGC CGTGTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCGTTCGAAGAGGCGATCCACACCCACGCCTATCAGTACTGCATCGAA TCGCTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGTCGGTCGCCAAAAAAGCCACCTGGGGCCTGAAATACACCCGTTCGATCT CTGATCCGAAGTTCGAAACCGGCACCGTCGAAACCGACAAAGAGCTACTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTG TGGCTTCACCCAAATCCTGTCGATGGGTCGCCGCAACAAGATGACCGGCGTCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCATCTGTGGGACGCCGAAATGAAGGAAGAAGCTTCGCAGATGATCCTGCAGGGCACCC AGCTCGAAATCGAATACGCGCGCGACACCATGCCACGCGGTGTGCTGGGCATGAACGCGGCCATGATGGAGGACTACCTCAAGTTCATCGCCAACCGTCG CCTGTCGCAAATCGGCCTGAAAGAAGAATACCCGGGCACCACTAACCCGTTCCCATGGATGAGCGAAATCATGGACTTGAAGAAAGAGAAAAACTTCTTC GAGACGCGGGTCATCGAGTACCAGACTGGCGGCGCTTTGAGCTGGGATTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCTCCGGCCAGGCTATACGCTGAACAAGAGGGCTGCCTGCGGGCAGCCCTTTTTTTCGGCTGGCTTTTATCAGCCATTATCGAAATCTTCGACGTCGGGT GCCTCCTGAAACACCCGAAAAAGCAGAATGAACGCAGATTTCACCGGCCAGCACCGATCAACAAATTGAGTTTGATCCCCCCTGAAAACAACTGTATAAA AACACAGTATTTTTTCAAAGCGACTCAGCCCCGGAGAATCCCCATGCCTCATTCAGCCATGCGCAGCACGTTCGAACGCATCATCATTAATCAATTCACG CCACTGCACTGCACACAAGCCCGCGAAATGCTTGGCTGGAACTTCGAGCACCTGAGCGAGCAATCAAAAGTCTCAGTGCAGGCGATTCAACGCTTCGAAG CCGGAGAGCCGGTGCGCGACGTCACCCGGCTGGCGCTGGCTTATAGCCTGGAAGCCGAAGGTCTGGTGTTCTTCCCGGGATTTGCTCCAGGGCGCGGCGG
|
|
| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDEGEVAVKGANAGHATEANMDRLDAAGGVAAQEARAVTAADSAAIIRAKAALDNLDVAEGLAELEGASARVAVDEKMMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKATWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|