Pseudomonas taetrolens DSM 21104, TU78_RS02970

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	480	645	1.7E-37
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	569	583	1.8E-12
Gene3D	G3DSA:1.10.287.130	-	-	-	382	479	2.5E-20
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	604	622	1.8E-12
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	416	481	1.2E-17
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	587	597	1.8E-12
Pfam	PF07695	7TM diverse intracellular signalling	IPR011623	7TM-DISM receptor, extracellular domain, type 1	182	384	5.7E-55
Gene3D	G3DSA:3.40.50.2300	-	-	-	669	795	2.4E-16
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	528	643	3.3E-19
CDD	cd16922	HATPase_EvgS-ArcB-TorS-like	-	-	540	642	6.20545E-37
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	528	644	1.7E-22
FunFam	G3DSA:3.30.565.10:FF:000010	Sensor histidine kinase RcsC	-	-	480	645	1.7E-42
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	470	641	2.75E-33
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	402	482	1.29E-17
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	669	785	1.21E-15
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	668	781	5.5E-5
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	628	641	1.8E-12
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	414	476	2.58937E-14
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	417	481	1.2E-14
Coils	Coil	Coil	-	-	396	416	-
Gene3D	G3DSA:2.60.40.2380	-	-	-	29	177	1.4E-37
PANTHER	PTHR45339	HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J	-	-	361	791	8.0E-83
Pfam	PF00072	Response regulator receiver domain	IPR001789	Signal transduction response regulator, receiver domain	670	781	2.4E-9
Pfam	PF07696	7TMR-DISM extracellular 2	IPR011622	7TM-DISM receptor, extracellular domain, type 2	33	169	1.2E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.