Pseudomonas taetrolens DSM 21104, TU78_RS02475 (obgE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 1_766794_46.3544, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTAATTCCTCACTAGGAGAATTGACTCATGGCACACAAAAAAGCTGGTGGTAGTACCCGTAACGGTCGCGACTCAGAAGCCAAACGCCTTGGCGTTAA GATGTATGGCGGCCAGGCTATCATTCCGGGCAACATCATCGTGCGTCAGCGCGGCACCCAATTCCACGCTGGCTACGGCGTTGGTATGGGTAAAGATCAC ACCCTGTTCGCGAAAGTGGAAGGCGTGATCAAGTTCCAGGTTAAAGGCGCCTTCGGTCGTCGCTATGTAAGCATCGTTCCGAAGACTGCAGTCGTCGCGG CGTAATAGCTTGGTAGCTGGAAGAGCCCTGTCTTGCGACGGGGCTTTTTCGTTTGTGGGGTGAGTCTCTTGCAAAACTGTTTGTATGGGCTGCTGGCGCT GGATTTAACGGTCGTTGATTGAGGTCGCTGCGCTCATTTTTGCAAGAGTCTTATGTCTTAGTGTTTATCGGCTCGTCCTGATGACGAGAGGCGTTTTGTT
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| DNA Sequence for Gene |
>TU78_RS02475
|obgE
ATGAAGTTTGTTGATGAAGTATCGATCAAGGTAAAAGCTGGCGACGGTGGTAACGGTTGCATGAGTTTCCGTCGCGAGAAGTTCATCGAAAACGGTGGTC CGAACGGTGGTGATGGTGGTGATGGTGGCTCGATCTACATGGTCGCTGACGAAAACCTCAACACCCTGGTTGACTACCGTTACACCCGTCACTTCGACGC CCAGCGTGGCTCGAATGGTGGCAGCGCCGACTGTACGGGGCGCAAGGGTGAGGACATGGTGCTGCGCGTTCCGGTCGGCACGACGGTGATCGATGCGGGT ACTCAGGAGATCATTGGTGACCTGACCAAGGCTGGCCAGCGTTTGCTGGTTGTGCATGGCGGCTGGCACGGCCTGGGTAACACGCGTTTCAAGTCCAGTA CCAACCGGGCTCCGCGCCAGACCACTCCGGGTAAGCCGGGTGAGCAGCGTGACCTGAAACTGGAGTTGAAAGTACTGGCTGACGTGGGTCTGCTGGGCTT GCCGAATGCGGGCAAAAGCACCTTTATTCGCTCGGTATCTGCAGCCAAGCCAAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCTAACCTGGGTGTG GTCAGTGTTGATCGCTGGAAAAGCTTTGTGATTGCCGATATCCCGGGCTTGATCGAAGGCGCTTCCGACGGTGCAGGCCTTGGGATTCGCTTCCTCAAGC ACTTGGCGCGTACGCGTCTGTTGCTGCACCTCGTGGACATGGCTCCGGTTGAAGGCACTGAAAGTGCTGCAGATACCGCTGAAGTCATTGTTAATGAGCT GACCAAGTTCAGCCCGTCTCTGGCTGAGCGTGATCGCTGGTTGATCCTGAACAAGTGCGATCAGTTGCCTCAGGAAGAGCATGATGCGCGGGTCAAGGAG GTGGTTGATCGCCTTGAGTGGACTGGCCCTGTGTATGTGATTTCGGCCATTGCCAAGATCGGTACAGAGAAGCTGTGTCACGACATCATGCGTTACCTGG AAGACCGTGCTGACCGTCTGGCCAATGATCCGGCTTACAAAGAAGAGCTGGCCGAGCTTGATCAGCGCATCGAGGACGAGGCGCGTGCGCAGTTGCAGGC GCTGGATGACAAGCGTGCCCTGCGTCGCAGTGGCGTGAAGAGCGTCCACGACATCGGTGAAGATGACTGGGACGAAGAAGATGTTGATGATGAAGATGGT CCGGAAATCATTTACGTCCGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCGTTGCAGTAAACTACAGCGCCGCTCACTAGAGCGGCGTTTTAGCATCTACGAAACGGTAATCAAAAATAATTCCATGGGTGGCGCTCGGTCGCGCCG TCCTCAGGCATAGGTTGGATGATGATGCGGAGCAAGGTGACGGGTGCGCGGCGTTGGGTCGTAAAGATCGGTAGCGCATTGCTGACAGCGGATGGTAAAG GCCTGGATCGCGCTGCGATGGGCGTTTGGGTCGAGCAGATGGTGGCCTTGCACGAGGCCGGCGTTGAGCTGGTGCTGGTGTCTTCGGGCGCGGTAGCGGC AGGCATGAGCCGTTTGGGCTGGACGGTACGACCGAGTGCCATGCATGAGCTGCAAGCCGCTGCGGCCATTGGTCAAATGGGGTTGGTGCAGGCCTGGGAG TCGAGCTTTGCCGAGCATTCGCGGCACACCGCGCAAATCTTGCTGACCCATGATGACCTGTCTGATCGCAAGCGTTACCTGAATGCCCGTAGCACCTTGC
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| Amino Acid Sequence |
>GTPase CgtA
MKFVDEVSIKVKAGDGGNGCMSFRREKFIENGGPNGGDGGDGGSIYMVADENLNTLVDYRYTRHFDAQRGSNGGSADCTGRKGEDMVLRVPVGTTVIDAG TQEIIGDLTKAGQRLLVVHGGWHGLGNTRFKSSTNRAPRQTTPGKPGEQRDLKLELKVLADVGLLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPNLGV VSVDRWKSFVIADIPGLIEGASDGAGLGIRFLKHLARTRLLLHLVDMAPVEGTESAADTAEVIVNELTKFSPSLAERDRWLILNKCDQLPQEEHDARVKE VVDRLEWTGPVYVISAIAKIGTEKLCHDIMRYLEDRADRLANDPAYKEELAELDQRIEDEARAQLQALDDKRALRRSGVKSVHDIGEDDWDEEDVDDEDG PEIIYVRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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