Pseudomonas taetrolens DSM 21104, TU78_RS01350

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF47384	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	611	624	9.2E-13
Gene3D	G3DSA:1.10.287.130	-	-	-	385	472	2.1E-17
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	409	477	1.9E-7
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	197	312	2.1E-25
Coils	Coil	Coil	-	-	345	375	-
CDD	cd12914	PDC1_DGC_like	-	-	100	197	1.53916E-10
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	394	475	3.53E-10
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	117	195	2.7E-30
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	478	632	2.9E-34
Pfam	PF02743	Cache domain	IPR033479	Double Cache domain 1	52	302	6.1E-18
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	587	605	9.2E-13
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	482	626	3.54E-33
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	556	570	9.2E-13
SUPERFAMILY	SSF103190	Sensory domain-like	IPR029151	Periplasmic sensor-like domain superfamily	81	205	1.96E-16
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	517	625	6.7E-19
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	407	473	9.45127E-7
PIRSF	PIRSF036431	HK_DctB	IPR017055	Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator)	8	633	0.0
Gene3D	G3DSA:6.10.250.3020	-	-	-	53	113	1.7E-7
PANTHER	PTHR43065	SENSOR HISTIDINE KINASE	-	-	251	631	9.4E-48
FunFam	G3DSA:1.10.287.130:FF:000049	C4-dicarboxylate transport sensor protein DctB	-	-	385	472	5.3E-32
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	574	584	9.2E-13
Coils	Coil	Coil	-	-	380	400	-
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	411	475	7.4E-7
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	516	627	5.2E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.