Pseudomonas taetrolens DSM 21104, TU78_RS00985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas taetrolens strain DSM 21104 1_766794_46.3544, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAAGCGCTGGCGCCAACGCCGCCAAGGTCAAGCTGACCCTGCCCGATGGCAGCGAATACCCGGAAGAAGGCCGACTCGAGTTCAGCGAAGTGTCGGTTGA CGAAACAACGGGCTCCGTAACCTTGCGTGCCGTGTTCCCGAACCCGAATGACACGCTGTTGCCGGGCATGTTTGTGCACGCGCAACTGGAAGCAGGGGTC GACAGCAATGCGATCCTCGCACCTCAGATCGGCGTGACACACAACCTCAAGGGCCAACCGACGGCGATGATCGTCAATCAGGACAACAAGGTTGAACAGC GCGTACTTCAAGCAACGCGTACGGTAGGCAGCGACTGGCTGGTAGAAAAAGGCCTCAACGCTGGTGATCGCCTGATTACAGACGGCCTGCAGTACATCAA GCCAGGTGTTGAAGTAAAAATCATGGAAAAACCACAAGGCGCAACCCCGGCATCTGCCCCGGCAACAGAAAAAGCTGCAGGCAGTAAAGGGGAGTAAACC
DNA Sequence for Gene
>TU78_RS00985
ATGTCGAAATTTTTTATCGACCGTCCGATTTTTGCCTGGGTAATTGCCCTGGTCATCATGCTGGTCGGGGCTTTATCCATCCTGAGTCTGCCAATCAACC AATACCCGAGCATCGCGCCACCGGCCATCTCGATTGCAGTGAACTACCCGGGCGCTTCGGCGCAAACCGTGCAGGATACTGTGGTTCAGGTGATCGAGCA GCAGCTCAACGGGATTGACCACCTGCGCTATGTATCCTCGGAAAGTAACTCCGACGGCAGCATGAGCATCACGGCTACGTTCGAGCAAGGTACTGACCCG GATACCGCTCAGGTTCAGGTTCAGAACAAGCTCAACCTGGCAACGCCCCTGCTGCCTCAAGAAGTTCAGCAGCAGGGTATCCGTGTCACCAAGGCAGTGA AAAACTTCCTGATGGTGATCGGCGTGGTGTCGGAAAACGGCAGTATGAACAAGGACGACCTGTCGAACTACATCGTCTCCAACATGCAGGACCCGATTTC CCGTACTTCAGGTGTGGGCGACTTCCAGGTGTTTGGTGCTCAGTACGCCATGCGTATCTGGCTCGACCCGGCCAAGCTGAACAAATTCAACCTGACCCCG GTGGACGTCAAGTCGGCCATCAGCGCACAGAACGTACAGGTGTCCTCCGGGCAACTGGGCGGCCTGCCAGCAGTAAAAGGTCAGGAGCTGAACGCGACCA TCATCGGTAAAACCCGTCTGCAAACCGCTGAGCAGTTCGAAAAGATCCTGCTCAAGGTCAACACCGACGGCTCACAGGTACGCCTGAAAGATGTCGCCGA AGTTGGCCTGGGTGGTGAGAACTACAGCATCAGTGCGCAGTACAACGGCATGCCGTCTTCGGGCCTTGCGATCAAGCTGGCTCCGGGCTCCAACGCCCTG GACACCGCCAAGGCACTGCGCGCAACCATCGCAGACCTGGAACCCTTCTTCCCCGAAGGCATGAAAGTCGTTTACCCGTATGACACCACTCCAGTGGTTT CTGCATCGATCGAAGGCGTACTTGAGACGCTGGTCGAAGCTGTCGCGCTGGTGTTCCTGGTCATGTTCCTGTTCCTGCAGAACTTCCGTGCCACCATCAT CACCACGATGACGGTGCCCGTGGTATTGCTCGGCACTTTCGGGATTCTGGCCGCTGCCGGCTTCAGTATTAACACCCTGACCATGTTCGGCATGGTACTG GCCATCGGCCTGCTGGTGGACGATGCGATCGTCGTGGTTGAAAACGTCGAGCGGGTAATGTCCGAGGAAGGACTGCCACCCAAGGAAGCCACCAAGAAAT CCATGGAGCAGATCCAGGGAGCGCTGGTCGGTATTGCTCTGGTGCTGTCGGCAGTATTGCTGCCAATGGCCTTCTTCAGCGGTTCGACCGGTGTGATTTA CCGCCAGTTCTCGATCACCATTGTTTCGGCGATGGGCCTTTCGGTGCTGGTTGCCCTGATCTTTACCCCGGCCTTGTGCGCCACCATGCTCAAGCCAATT GCCAAAGGCGATCACGGCGAGAACAAGCGCGGCTTCTTCGGCTGGTTCAACCGCACCTTCGACAGCGGCGTAAAACGCTATGAAAAAGGTGTTGGCAGCA TCCTGCGCCATAAGGCCCCGTACTTCCTGGCCTATGTCCTGATCGTTGTCGGCATGGTGTTCCTGTTCACGCGCATCCCGACCTCCTTCCTTCCGGAAGA AGATCAGGGCGTACTGTTTGCTCAGGTGCAAACACCGGCAGGCACGACCGCAGAGCGTACACAGGACGTCATCGACCGGATGCGTGAGTACCTGTTGACC GATGAGTCGGCAGCCGTATCTTCCGTATTTACCGTAAACGGCTTTAACTTCGCCGGTCGCGGTCAAAGCTCCGGCATGGCGTTCATCATGCTCAAACCCT GGGGCGAGCGTGATGCCGACAACAGCGTATTTGCGCTGGCAAGACGGGCTCAGGCGCACTTCTCAACGTTCCGCGATGCCATGGTGTTCGCTTTTGCACC GCCGGCAGTGATGGAGCTGGGTAACGCAACCGGTTTTGACGTTTACCTGCAAGACCGCTCCGGTATTGGTCACGAGAAGCTGATGGAGGCCCGCAACCAG TTCCTGGGGATGGCCGCTCAAAGCAAGATCCTGGCCGGTGTGCGCCCGAACGGCCTGAACGATGAGCCGCAGTACCAGCTGGAAATTGACGACGAAGCGG CCCGCGCCCTGGGCGTTGAGCTGAGCGACATCAACAACACCCTGTCGATCGGGCTGGGTGCCAGTTACGTCAACGACTTCATCGACCACGGCCGTGTGAA AAAGGTTTACCTGCAAGGTAAAGCCGATTCGCGGATGAACCCGGAAGACTTGAAGAAGTGGTACGTGCGCAATGGTGACGGAACCATGGTGCCGTTCTCG GCCTTCGCCAAGGGCAAGTGGATCTATGGTCCGCCCAAGCTCTCGCGTTACAACGGCGTAGAAGCCATGGAAGTTCTGGGTGCTCCGGCACCGGGCTACA GCAGTGGCCAGGCCATGGCTGAAGTTGAAGCACTGGCCAAGAAACTGCCGGCCGGTGTGGGGATTTCCTGGACAGGGCTGTCATACGAGGAGCGTCTGTC AGGATCCCAGGCCCCTGCCCTGTACGCTATATCCTTGCTGATGGTATTCCTGTGCCTTGCTGCACTGTACGAAAGCTGGTCGATCCCGATTGCCGTCATG TTGGTGGTGCCACTGGGGATTATCGGGGCGTTGATGGCGACGAGCCTTCGCGGGCTGTCCAACGACGTGTACTTCCAGGTGGGCTTGCTCACGACCATCG GTCTGGCCTCGAAAAACGCCATTCTGATCGTCGAGTTTGCCAAAGAGCTGCACGAGCAAGGACGAACCCTGACGGAGGCCGCGATTGAAGCGTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCTCTGGCGTTTGTACTGGGCGTGATCCCGCTGGCCATCTCCTCGGGCGCAGGCTCGGGCAGCCAGCATGCGATC GGTACCGGCGTTATCGGCGGTATGATCACCGCTACCGTACTGGCCGTATTCTGGGTACCGCTGTTCTTTGTCGCCGTATCGTCCTTTGGCAGCAAAAAAG ATTCAGAGAAAAAAGTGGACCTGACTAAAACTCCAAGCAACGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCCCTTCTAGCCCTCGCTGTCGCCGCGTTTACCCTGGGCGGCTGCTCGCTGATCCCGGATTACCAGCGCCCAGAAGCGCCGGTAGCGGCTCAGTA CCCCGAAGGCCCGGCATATTCGCCAACCGAAGCGGCCAATCAGGCCGCCGCGGAACAAGGCTGGCGTCAGTTTTTCCATGACCCGGCCCTGCAACAACTG ATTCAGACGGCTCTGGTCAACAACCGCGACCTCCGGGTCGCTGCGTTGAACATCGACGCCTATGCCGCGCAATACCGTATCCAGCGTGCAGACCTGTTCC CGGCGGTTTCGGCCAATGGCAGCGGTAGCCGTCAACGTACACCGGCAAACATGTCGCAAACCGGAGAGTCGGGTATCAGCAGCACCTACTCGGCGACGCT TGGGGTCAGTGCGTATGAACTCGACTTGTTCGGCCGGGTGCGCAGCCTGAGCGATCAGGCCTTGCAGAACTACTTCGCTACTGAAGAAGCCCGCCGCTCG
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILSLPINQYPSIAPPAISIAVNYPGASAQTVQDTVVQVIEQQLNGIDHLRYVSSESNSDGSMSITATFEQGTDP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGVVSENGSMNKDDLSNYIVSNMQDPISRTSGVGDFQVFGAQYAMRIWLDPAKLNKFNLTP VDVKSAISAQNVQVSSGQLGGLPAVKGQELNATIIGKTRLQTAEQFEKILLKVNTDGSQVRLKDVAEVGLGGENYSISAQYNGMPSSGLAIKLAPGSNAL DTAKALRATIADLEPFFPEGMKVVYPYDTTPVVSASIEGVLETLVEAVALVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLPPKEATKKSMEQIQGALVGIALVLSAVLLPMAFFSGSTGVIYRQFSITIVSAMGLSVLVALIFTPALCATMLKPI AKGDHGENKRGFFGWFNRTFDSGVKRYEKGVGSILRHKAPYFLAYVLIVVGMVFLFTRIPTSFLPEEDQGVLFAQVQTPAGTTAERTQDVIDRMREYLLT DESAAVSSVFTVNGFNFAGRGQSSGMAFIMLKPWGERDADNSVFALARRAQAHFSTFRDAMVFAFAPPAVMELGNATGFDVYLQDRSGIGHEKLMEARNQ FLGMAAQSKILAGVRPNGLNDEPQYQLEIDDEAARALGVELSDINNTLSIGLGASYVNDFIDHGRVKKVYLQGKADSRMNPEDLKKWYVRNGDGTMVPFS AFAKGKWIYGPPKLSRYNGVEAMEVLGAPAPGYSSGQAMAEVEALAKKLPAGVGISWTGLSYEERLSGSQAPALYAISLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALMATSLRGLSNDVYFQVGLLTTIGLASKNAILIVEFAKELHEQGRTLTEAAIEACRMRLRPIIMTSLAFVLGVIPLAISSGAGSGSQHAI GTGVIGGMITATVLAVFWVPLFFVAVSSFGSKKDSEKKVDLTKTPSNEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site