Pseudomonas taetrolens DSM 21104, TU78_RS00445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 1_766794_46.3544, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACAACACGCCTGCGTTGAGCCTGGCCGCGCAAAGTCACCGCGCCGGGCTGATCGTGTTGCGCTCGTTTGGCAAGTTCTTTGGTTTGGCGGGGGTTCGAT TGGGCTTTGTGCTGGCTGAACTCAAACTGCTCAAATTGTTGGCCGAGCAAGTCGGTCCCTGGGCAGTGAGCGGGCCGACGCGGATTGTCGGCCAAGCGTG TCTGGTCGACACCGAAGCCCATGTTCGCCAGCGTGAACGCAGCGAGTTGGCCAGCGAACGATTGGCGGCGCTGTTGACGCTGCACGGCTTGTCGCCCCAG GGAGGCTGCGCGTTGTTTCAGTGGCTGGCCACGCCCTACGCCGAGCGTCTTTACGACTTTATGGCGCAGCGTGGCATCCTGCTGCGCCTGTTTGCCCACA ACAGCAGCGTGCGTTTTGGCCTGCCTGCCGACGACGCTGACTGGTTGCGGCTGGAGCAGGCCTTGTCCGCGTACACCGAGGCCTGTACCAAGGAAAACCC
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| DNA Sequence for Gene |
>TU78_RS00445
ATGAGCACGTTAATGGTGCAAGGCACCACGTCCGATGCCGGTAAAAGCACGCTGGTCACAGCCCTGTGCCGTTGGTTGACTCGCCAGGGTGTGGGCGTGG TGCCTTTCAAACCGCAGAACATGGCGCTCAACAGTGCCGTGACCGCCGAGGGCGGTGAGATTGGCCGGGCTCAGGCCGTGCAAGCCCAAGCCGCGGGGCT GGCGCCGCACACCGATATGAATCCGGTGCTGCTCAAGCCCAATAGCGACACCGGCGCCCAGGTGATTATCCATGGGCGAGCCGTCACCAGCATGAACGCT GTCGCCTATCACGACTACAAGGCCATCGCCATGCAGGCGGTACTGGCTTCGCATCAACGGCTGAGTGCCGGCTATCCGGTGGTCATGGTTGAAGGCGCGG GTTCTCCAGCCGAAATCAATTTGCGGGCTGGAGACATCGCAAACATGGGCTTTGCCGAGGCGGTGGATTGCCCGGTGGTGTTGATCGCCGATATCAATCG CGGCGGAGTGTTCGCTCATTTGGTCGGCACCCTCGAGCTGCTGTCCGACACCGAGCAGGCACGGGTCAAGGGTTTCATCATCAACCGTTTTCGCGGTGAT ATCGCTTTGCTGCAGCCTGGTCTTGACTGGCTGGAGCAGAGGACCGGCAAGCCCGTGATCGGGGTTCTGCCCTATGTGATGGACTTGCACCTTGAGGCTG AAGACGGCATCGATCAGCGTCAGACCGACAAGGTCGAACGTGTGCTCAAGGTCGTGGTGCCGGTATTGCCGCGGATCAGCAATCACACGGACTTCGATCC ATTACGTTTGCATCCGCAGGTGGATTTGCAGTTTGTGGGCCCCGGACAGGCGATTCCGTCGGCCGACCTGATCATTCTCCCGGGCTCCAAAAGCGTGCGC AGCGATCTGGCCTATCTGCGGGCCAATGGCTGGGACACGGCGATCAACCGTCACCTGCGCTATGGCGGAAGAGTGCTGGGGATTTGCGGCGGCCTGCAGA TGCTCGGCGAGCAGGTCCATGACCCGCTGGGGCTCGAGGGTGCGCCGGGCTCAAGCAGCGGCCTGGGCTTGCTGGCATTCAGTACCGAGCTGGAGGCCGA AAAACAGCTGCGTAACGTGCGCGGGCATTTGCAGCTGGAAAACGCTGAAGTCACTGGCTACGAAATTCACGCGGGCGTCACCACCGGCGTTGCTCTTGAG CAGCCGATGGTGCATCTCGATGACGGTCGTTGCGACGGCGCGCAAAGTGCGGACGGACAAGTTCTGGGCACCTATCTGCATGGTTTGTTCGAGTCGCCTG CCGCTTGCAGCGCGCTGCTGCGCTGGGCCGGGCTGGAGGACGTGCAGGCGGTGGATTACCACGCACTGCGTGAGCGGGATATCGAGCGTCTGGCCGACCT GGTGGAAAACCACCTGGACACTGCTTATTTGCGAGCACTTTGTGGTCTGAGCCGGGAGCATCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATGTTGCAGCTGATTTTGGGCGGTGCCCGTTCTGGCAAAAGCCGCCTGGCCGAGAAACTGGCGAGCGAGTCCGGGCTCGCAGTGACCTACATTGCGACC AGCCAGCCGCTGGATGGCGAGATGAACGAGCGCGTGCGTCATCATCGCGAACGTCGTCCGGCGCACTGGGGATTGATTGAAGAACCGGTCGAACTGGCCC GGGTGCTGCGTGACAACGCGAGTGCCGACAGCTGCCTGCTGGTGGATTGCCTGACGCTGTGGATGACCAATCTGCTGATGTTGGACGATCCCCTGCAGCT CGGTGCCGAGCGCGATGCGCTGCTGGAATGCCTGGCTGAACTGCCGGGTGAAATTGTGTTTGTCAGCAACGAAACCGGAATGGGTGTCGTGCCGCTGGGC GAATTGACTCGCCGCTATGTCGATGAAGCCGGTTGGTTGCATCAAGCCTTGGCCGCGCACTGTCAGCGGGTAGTGTTGACTGTGGCGGGCCTGCCCCTGA
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| Amino Acid Sequence |
>cobyric acid synthase
MSTLMVQGTTSDAGKSTLVTALCRWLTRQGVGVVPFKPQNMALNSAVTAEGGEIGRAQAVQAQAAGLAPHTDMNPVLLKPNSDTGAQVIIHGRAVTSMNA VAYHDYKAIAMQAVLASHQRLSAGYPVVMVEGAGSPAEINLRAGDIANMGFAEAVDCPVVLIADINRGGVFAHLVGTLELLSDTEQARVKGFIINRFRGD IALLQPGLDWLEQRTGKPVIGVLPYVMDLHLEAEDGIDQRQTDKVERVLKVVVPVLPRISNHTDFDPLRLHPQVDLQFVGPGQAIPSADLIILPGSKSVR SDLAYLRANGWDTAINRHLRYGGRVLGICGGLQMLGEQVHDPLGLEGAPGSSSGLGLLAFSTELEAEKQLRNVRGHLQLENAEVTGYEIHAGVTTGVALE QPMVHLDDGRCDGAQSADGQVLGTYLHGLFESPAACSALLRWAGLEDVQAVDYHALRERDIERLADLVENHLDTAYLRALCGLSREHP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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