Pseudomonas taetrolens DSM 21104, TU78_RS21695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 11_172282_63.8884, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTCTGGGTGCTGCTGATTTACTTCGGCAGCGTGAACCTGGTCCGTGCCATCGGCGAAGCCATCGGCATGCCCGAACTCACCCTCAGCGCTTTCGCGG CGGGTGTGATCGCGCTGGGGCTGTGTTTTGGTGCCTATGCGACCGAAGTGTTTCGCGGTGCCATTCTGGCCATTCCCAAAGGTCACCGCGAAGCGGGCAT GGCCCTGGGCATGTCCAAGCCACGGATCTTCAGCAAACTGATCCTGCCGCAAATGTGGCGCATCGCCCTGCCCGGCCTGGGCAACCTGTTCATGATCCTG ATGAAAGACACCGCGCTGGTATCGGTGATCGGTCTGGAAGAAATCATGCGCCAGGCCCAGAACGCCGTGACCTTCGCCAAACACCCTTTCACCTTCTACA TGGTGGCCGCCGTGATGTACCTGGGCCTGACCGTATTGGCCATGGGCACGATGCACGTGCTTGAAAAACGCGCTGCGCGCGGCTTTGTGAGGAGGACGTA
|
|
| DNA Sequence for Gene |
>TU78_RS21695
ATGGAGTGGGAAATCATCCTCAAGTGGATGCCCAAGCTGATTCAGGGCGCGACCCTGACGCTGGAGCTGACGGCCATCTCGGTTCTCGCCGGTCTGATTG TGGCGATTCCGCTGGGCATCGCCCGTTCGTCCAGGCTGTGGTACGTGCGTGCACTGCCTTATGCCTACATCTTTTTCTTCCGGGGCACGCCCCTGCTGAT TCAGCTGTTCCTGGTGTATTACGGCCTGGCGCAATTCGACATGGTGCGTGAAAGCGTATTGTGGCCTTATCTGCGCAGCCCGTTCTGGTGCGCCATCATC ACCATGACCCTGCACACGGCGGCCTATATTGCCGAGATTCTGCGCGGCGCAATCCAAGCCATCCCACCGGGTGAAATCGAAGCCGCACGTGCCCTGGGCA TGTCTCGCTTCAAAACCCTGGTGCACATCGTCATGCCACGTGCCACGCGCATCGGCCTGCCGGCCTACAGCAACGAAGTGATCCTGATGCTCAAGGCCAG CTCGCTGGCGAGTACCGTGACCTTGCTGGAACTGACCGGCATGACCCGCACCATCATTGCCCGCAACTACCTGACGGTGGACATGTTCCTGACCGCCGGG ATGATCTACCTGGTGATGTCATTCGTACTGATTCAGGGCTTCAAACTGCTGGAGCGCTGGTTGCGCGTCGATGCCTGCCAAGGGCGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCTCACGTGCTGCGTGGCGAGGCTCTGCTCGCCCGCTTCCAGGCACTGGACGCCTTTCTGCATGAACACCAGCACCTGTGGCGCCCACGGCCCTTCACT CATCTGAATGTGCCGTGGGAAGCGCAGCACCCCGAACTGGCGCAGTGGTTGCGCCAGCGTTCGCTGCAAGACGCCGAAACCAGCCACAACCATCCCCAGC ACGTGCCCGCCCCTGCGCCATTCCCCGAACTGGCCACCACTTCCTGCACCCTGAGTTCGGTTGACCGGCTGGCGACACAGGTGCTTGCGCCCGCTAACCA GCGCTTGCAGGTGGACGTGCCGGGCCGAAAATGGCAACAGATTGAAGCCTTTGCCCAAAGCCTGACCTTCAAGCAAGCACCTGCCCACTGGCTGGACTGG TGTTCGGGCAAAGGCCATTTGGGGCGTCGGCTGCTGAGCGCCGGGCAGCAACTGACGTGCCTGGAATATGACCCGGCACTGATCGAATCCGGCCAGGGTC
|
|
| Amino Acid Sequence |
>ABC transporter permease
MEWEIILKWMPKLIQGATLTLELTAISVLAGLIVAIPLGIARSSRLWYVRALPYAYIFFFRGTPLLIQLFLVYYGLAQFDMVRESVLWPYLRSPFWCAII TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRFKTLVHIVMPRATRIGLPAYSNEVILMLKASSLASTVTLLELTGMTRTIIARNYLTVDMFLTAG MIYLVMSFVLIQGFKLLERWLRVDACQGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|