Pseudomonas taetrolens DSM 21104, TU78_RS21495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 11_172282_63.8884, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTGGTGCTGATCGGAGATGCGGCGCATACCATTCACCCGCTGGCCGGGCAGGGCGTTAACCTGGGGTTCCTGGATGCGGCTGTCCTGGCACAGGTGCT GCTGCACGCCGCCGATCGTGGCGAACGATTGGCCGATGTCCGCGTGCTGAGCCGTTACGAGCGCCGCCGCATGCCGCATAACCTGGCGCTCATGGCCGCA ATGGAGGGCTTTGAGCGATTGTTCCAGGCCGACTCGTTGGCCGTGCGCCTGCTGCGTAACACCGGTTTGAAATGGGTCAACAACATGCCCGAGGCCAAAG CCGTGTTTGTGCGCCAGGCCCTTGGCCTGACCGGTGATTTGCCGCCGCTGGCCAAACCCTGACCGATTGCGGCAGCGGCTGTCGCAGGCTTTTGTCGGGC CTGTAACATCTGGTAACGCCTCGGGGGCGAGTTAGGTTGAGCTGGCAAATGTGATTCACTACCATTTACGCCCGATTCGCATTAAGAGAGACCGCCCTCC
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| DNA Sequence for Gene |
>TU78_RS21495
ATGTTGGCACCCAAGCGTCTACTGACTGCCCTGGCCCTTACCCTTTTCGGGAGCAGCGTATTTGCTGCCGACGAAGTGGTGGTCTATTCCTCGCGTATCG ATGAGCTGATCAAGCCGGTATTTGATGCCTATACCGCCAAGACCGGGGTCAAGGTCAAGTTCATCACCGACAAAGAGGCACCATTGATGCAGCGCATCAA GGCTGAAGGCGAAAACGCCACGGCCGACCTGTTGCTGACCGTGGACGCCGGCAACCTCTGGCAAGCCGAGCAAATGGGCATCCTGCAGCCGCTCACTTCT GACGTGATCGACAAGAACATTCCTCCGCAATACCGCTCTTCTTCCCACCAGTGGACCGGTCTGAGCCTGCGCGCCCGTACCATCGCCTATTCGACCGACC GCGTTAAACCTGAAGAGCTGTCGACCTACGAAGCCCTGGCTGGCAAGGAGTGGGAAGGCCGCCTGTGCCTGCGTACGGCCAAAAAGGTGTACAACCAGTC GCTGACCGCCACCATGATCGAAGTAAACGGTGCGCAAAAAACCGAAGAGATCCTCAAGGGCTGGGTGAACAACCTGTCCACTGACGTATTCTCGGATGAC ATCGCGGTGCTGGAAGCGATCAACGCCGGGCAGTGCGATGTCGGCATCGTCAATACCTACTACTACGGTCGCCTGCACAAGCAGAAGCCGGATCTGGCGG TCAAATTGTTCTGGCCGAACCAGGCGGACCGGGGTGTGCACGTCAACCTGTCGGGCATTGGCCTGACCAAATATGCGCCGCACCCGGAAGCGGCCAAGGC ACTGGTCGAGTGGATGACCACACCTGAAGCCCAAGCGATTTTTGCCGGCACCAACCAGGAATTCCCGGCCAATCCAGGCGTTGCCCCTTCGGCTGAAGTC GCCAGCTGGGGGAGTTTCAAGGCCGACGCCATGCCCGTTGAAGTTGCAGGCAAGCGACAGGCCGAAGCGATCCGCATGATGGACCGCGCTGGCTGGAACT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TAAATACACAAAACGCACAACCTTTGTAGCCGCTGCCGCAGGCTGAGACAGGGGCCGCAGGACTTTCAAATTATTGAGGGTACTGCGCGACCCGTCGCAT TCTGCGGCAGCGGCTATATGCTTTCTGCGTGTTGTACCTCCACCCACCTTCCGAGAGTTCTTCGTGGCCCATCCTGCCCAACGTCGCTGGTATCCGCTGG TCTTTGTCATTGCAGCTCTGGTTCTGTTGCCGCTGAGCGTCTTGCTGCTGTCCTGGCAAAGCATTGATACCCAGATATGGAGCCATCTTTGGGACACGCA AATGCCACGTTTGCTGGGTAACACCCTGACACTGATCGTGGGGGTCGGCATTGGGGTGACGCTGCTCGGCGTGAGTCTGGCGTGGCTGACCAGTTTGTGC GAGTTCCCGGGCCGGCGCTGGCTGGACTGGGCCCTGATGCTGCCGTTTGCGATTCCGGCCTATGTGCTGGCATTCGTGTTTGTGGGTTTGCTCGACTTTG
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| Amino Acid Sequence |
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALTLFGSSVFAADEVVVYSSRIDELIKPVFDAYTAKTGVKVKFITDKEAPLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPLTS DVIDKNIPPQYRSSSHQWTGLSLRARTIAYSTDRVKPEELSTYEALAGKEWEGRLCLRTAKKVYNQSLTATMIEVNGAQKTEEILKGWVNNLSTDVFSDD IAVLEAINAGQCDVGIVNTYYYGRLHKQKPDLAVKLFWPNQADRGVHVNLSGIGLTKYAPHPEAAKALVEWMTTPEAQAIFAGTNQEFPANPGVAPSAEV ASWGSFKADAMPVEVAGKRQAEAIRMMDRAGWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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