Pseudomonas taetrolens DSM 21104, TU78_RS21140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taetrolens strain DSM 21104 10_197900_61.7662, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGACTTGATGCAGGAAGTCGACCGCACCGTTGATCATATGAAAGACGAAGCGGCAAACTTTCCTGACCCGGCCGACCGCGCCAGCCAGGAAGAAGAAT TCAGCCTGGAACTGCGTGCTCGTGATCGCGAGCGCAAGCTGATCAAGAAAATCGACAAGACGCTGCAACTGATCGAGGACGAAGAATACGGCTGGTGCGA ATCCTGCGGCGTTGAAATCGGTATTCGTCGACTCGAAGCCCGTCCCACTGCCGACATGTGCGTAGACTGCAAAACCTTGGCTGAAATCAAGGAAAAACAA GTCGGCAAGTAATCGCCGGCTTGACCAAATGGGGCGTGCGAACGCCCCATTTTTGTTTCTGCAGTTTGGTCGCAGGGCTCTGTAGCCGCTGCCGCAGACT GCGTTAAGGCCCGAAGGGCCTTCAACGTACCAGGGGTGCTACGTCGCAGCGACGCACCATCCCCATCGCAGCCTTTGGCAGCGGCTACAGGATTTTTGTC
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| DNA Sequence for Gene |
>TU78_RS21140
ATGACTGCTCCCTCCTACATCGGGCGCTTCGCCCCAACGCCCAGTGGCCACTTGCATTTTGGCTCGTTGGTCGCCGCCCTCGCCTCTTATCTTGATGCCC GTGCAGTGGGCGGCCGCTGGTTGCTGCGCATGGAAGACCTCGATCCGCCGCGGGAAATGCCCGGAGCCCAGGCCGCGATTCTCCATGCCCTTGAGCAATA TGGTTTTGAATGGGATGGCGAGCTGGTTCGCCAGAGCGACCGGCACGCCGCTTACGCCGAAGTGGTGGATCGACTGTTCAGTCTGGGCCTGGCTTACGCC TGCACCTGTTCGCGCAAGCAACTGGAGGGATATAACGGCATTTACCCGGGGCTGTGCCGAAATGCGGGACACTCGATGGATAATGCCGCCATACGCCTGC GCGTTCCCGAGCTGACCTATGCCTTCGAAGACCGGGTGCAGGGTGAATATCGACAGCATCTGGGCCGGGAGGTGGGGGATTTTGTGATTCGCCGGCGCGA CGGCCTGTACGCCTATCAATTGGCCGTAGTGCTGGATGATGCCTGGCAGGGAGTCACGGATATCGTACGCGGGGCCGACTTGCTGGACTCCACTGCGCGT CAGCTCTATCTGCAAGAGCTCCTGGGATTGTCGCAACCCCGTTATCTGCATGTGCCGCTGATCGTGCAACCCGATGGCCACAAACTCGGCAAATCCTACC GCTCGCCACCCCTGACACCCGATCAGGCCACACCGTTACTGCTTCGTGCCCTGCGCACATTGGGCCAGGTCACCGATGACTGCCTGAATGATGCCACCCC GCGTGAAGTCCTCGATTGGGCGATCACGCACTGGGACGCTAACCTTATCCCGCGTACGCTGACCCTGGCCGAAGCGCAATTACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCCCTTGCAGGTTGCCAGCCATCCGTTACCATCGCCGCACGTTTTTGGGCATGCGGCCTGTAAAAGTGAGGGCAGGATGTATATCTATCGATTGGTCC TGTTACTGGTTGTCGGGATCTACCTGTTTTCTCCCGCCATCATGGATTGGTGGATCGACGCGACGGGCGCCTGGTACAGGCCCTATCTGCTCTGGCTGAT TCTGATCGTTGTGACCTTTATTCTGCAGAGCCAAAAAGATGCCGATGAGCTTTAGCCTGACCCAGATGATCCTCATCAGCGCCGCTTATTTGACGGTGCT GTTTGGCGTAGCCTGGATCAGTGAACGCGGCATGATCCCGCGTGCAATCATTCGTCACCCGCTGACCTACACCTTGTCACTTGGCGTGTACGCCAGCGCC TGGGCGTTTTATGGCACGGTCGGTCTCGCTTACGAGTACGGCTACGGGTTCCTCTCCAGCTACCTCGGCGTTTCCGGAGCCTTTCTGCTTGCCCCGGTGC
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTAPSYIGRFAPTPSGHLHFGSLVAALASYLDARAVGGRWLLRMEDLDPPREMPGAQAAILHALEQYGFEWDGELVRQSDRHAAYAEVVDRLFSLGLAYA CTCSRKQLEGYNGIYPGLCRNAGHSMDNAAIRLRVPELTYAFEDRVQGEYRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQGVTDIVRGADLLDSTAR QLYLQELLGLSQPRYLHVPLIVQPDGHKLGKSYRSPPLTPDQATPLLLRALRTLGQVTDDCLNDATPREVLDWAITHWDANLIPRTLTLAEAQLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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