Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTTCGGCCTCGGCGGTAATCGCCGGGACTTCGCTGCGGTCCTTGAAGTGATTGATCTTCGGGATACCGCCAACAAACGACCAGAGCAGCGCGACCGGG TCTTCCAGTGCCAGCCAAGCCTGCGCATTGGTGCGCACCGCCTTGAGCTTGAGGCGGTTGCGGATGATGCTCGGATCAAGCATCAACGCCTCTATTTCAG CATCGCTCAACTGCGCCAGGCGCTCGACGTCGAAACCGTGCAGCACTTCGCGATAACGCGCCCGCCGCTTGAGAATCGTGATCCACGACAGCCCGGCCTG GAACCCTTCGAGCAAAAGCAACTCGAAGAGCTTCTGCGCATCGCGCAGCGGCACTCCCCACTCCTGATCGTGATATGCGATGTACAGGGGGTCTTCGTTG CACCAAAAGCAGCGTGTCATAGGGCTCCCAACGAGTGGACGTGCGGCCGAATCGGGTATACTCCCGCTCTTTGAATCGCAGCCCAGCACAGGTGAAATTT
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DNA Sequence for Gene |
>P406_RS06015
GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACTTGATCCTCGCCCTCCAGCAATACTGGGCAGAACAAGGTTGCGTGGTACTTCAGCCCTACG ATATGGAAGTAGGCGCCGGCACGTTCCACACTGCCACGTTTCTGCGCGCCGTAGGCCCGGAAACCTGGAACGCCGCTTACGTACAGCCAAGCCGTCGCCC GACTGACGGCCGCTACGGCGAAAACCCGAACCGCCTGCAGCACTATTACCAGTTTCAGGTGATTCTCAAGCCGAACCCGGACAACTTCCAGGAACTGTAC CTGGGCTCGCTCAAGCACATCGGCCTCGATCCGCTGGTGCACGACGTGCGCTTCGTCGAAGACAACTGGGAATCGCCGACGCTGGGCGCCTGGGGTCTGG GCTGGGAGATCTGGCTCAACGGCATGGAAGTCTCGCAGTTCACCTACTTCCAGCAGGTCGGTGGTCTGGAGTGCTACCCGGTCACCGGCGAAATAACCTA CGGCCTCGAGCGTCTGGCGATGTACCAGCAGGGCGTGGACTCGGTCTACGATCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTGACCTACGGCGACGTG TTCCACCAGAACGAGGTCGAGCAGTCGACCTACAACTTCGAACACGCCAACGTCGACAAGCTGTTCGAGCTGTTCGACTTCTACGAAAGCGAAGCCGCAC GCCTGATCGAGCTGGAGCTGCCATTGCCCGGCTACGAAATGGTCCTCAAGGCCTCGCACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGAC GGCGCGTCAGCAATACATCCTGCGCGTACGCACGCTGGCCCGTTCGGTGGCTCAAGCCTACCTGCAGGCCCGGGCCCGTCTCGGCTTCCCGATGGCGCCG CCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGCTCAAGATTTTCTGGTCGAGCTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCTCTGGCCGATGCGTTTCTCGCCGGTATTGAAAAAGGCCT CACAGGCGCAGGTCTGACCTACAGCGCCAAACAGGTCTACGCCGCACCGCGCCGTCTGGCCGTGCTGATTACCGCACTGGCCACGCAACAACCGGATCGC AGCGTCAACCTCGACGGCCCACCGCGTCAGGCAGCGTTCGACGCCGACGGTAACCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTCGACC TGAGCGAAATCGATCAGAGCGGCCCGAAACTGCGCTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCGCTGTTGCCAACCATCGTCGAAGACTCGCT GAACGACCTGCCGATTGCCAAGCGCATGCGCTGGGGTGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTGGTGATGCTGTTCGGTGATCAGGTC
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Amino Acid Sequence |
>glycine--tRNA ligase subunit alpha
MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVILKPNPDNFQELY LGSLKHIGLDPLVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECYPVTGEITYGLERLAMYQQGVDSVYDLVWADGPFGKVTYGDV FHQNEVEQSTYNFEHANVDKLFELFDFYESEAARLIELELPLPGYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARSVAQAYLQARARLGFPMAP PDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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