Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS22500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig64, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGCATCGAAGAGCATCTGCGGGTCCAGGCCGGCCGTCGGGCTGAGCATCAGGTTGCGCACATCGTCGCTGGCCGGGTTGGCGGGGCCGAGCCCTGCCG CCATCAAGGCACCGATCAACCCGTCATGATCGCCAACAATGCCGCGAATCTGCAGGTTGGCGCGGTTGGTGGCCTCGATAACGCCCTGTGCATAGGTGCG CGCGGCCTCGGCAACGGCCATGGCCTGCGCACTGCTGATCACCCCGCCCGCCAGCTTGATCCGGCAGATCCCGCCGTCCAGTGCCGGGACGATACGCAGC AACCCCGGACAGGCCGAGGGGCGTAGCGTTGCAGAGGATGTGCGAGCGGACTGCTGCTCGTTCAATGGGTCACCCGATGTGAACTGGCTGGAAACGGACG TTGATTAGAGCACTTGTACCCCGTCGGGCGCGGTATTATGCCTGCTTTGTCCGCAGGCATGAAAAGGCGCTCTGTCGGAAGTTCGGATTGAGGTAGGTAC
|
|
| DNA Sequence for Gene |
>P406_RS22500
ATGTCGCCGTGGCTGACAGTCGTGGGAATCGGAGAAGACGGTTACAAGGGGCTCGGCAAGAACGCCAGACACGCTCTGCTGCACGCTGATCAGGTGTTCG GCGGCCCGCGCCAGCTGGCGTTGCTGCCGCCGTGCATTCGCGCCGAGCGACGTGCGTGGCCGAGCCCTTTCTCGTTGAACCCTGTGCTCGAGCAGCGGGG TGCCGAGATCTGCGTGCTGGCCAGTGGCGACCCGATGATGTTCGGCGTCGGCGCCAGTCTTGCACGCGTGGTCAGCATTGACGAAATGCGTATTCTGCCT GCGCCCTCCTCTTACTCTCTGGCCGCCGCCCGCCTCGGCTGGCCACTGCAGGACGTCGTCACCCTGTCAGTGGTTGCCCGGCCGGTGGCCGCGCTGAACG CGCACTTCCACCATGGCATGCGTCTGCTGGTGTTGAGCAACGACGGCAGCAGCCCCGCCGTGATTGCCGGTTTGTTGCGCGAGCGCGGCTTTGGTCCAAG CCGCATGACCGTCCTGGAGCATCTGGGTGGCGAAGCCGAGCGGCGCGTCGAAGGGCTGGCCAGCGAGTGGGGCAACCCCGAGATTGCCGCGCTGAACCTG GTTGCCATCGATTGTCGCGCCGACGCCAGCGCCATCCGTCTGAGCCCCGTTTCAGGTCTGCCGGACAGCGCCTTCGAACATGACGGCCAACTCACCAAGC GCGACGTACGCGCCATCACCCTCGCACGCCTTGCACCGCTGCCGGGCGAACTGTTGTGGGATGTCGGCGCGGGCTGCGGCTCCATCGGCATCGAATGGAT GCGCGCGCACCCGACCTGCCGGGCGATGGCCATCGAAGCCGACGAAGGCCGCCAGCAACTGATCGAATTCAACCGCGAGGCACTTGGCGTGCCCGGCCTG CAACTGGTGCGGGGCAGCGCGCCTCAGGCACTGAGCGGTCTGGAACGCCCGGATGCGATTTTCATCGGCGGTGGCGTAACGCGTATCGGCGTGCTGGAAA CCTGCTGGGAACAGCTGCGCCCAGGCGGCCGACTGGTCGCCAATGCGGTCACCCTGCAAAGCGAAACGGCCTTGATGGCCTGGCGCGAACGGCATGGCGG CGAGCTGACCCGTATCCACGTCGCCCACGCGCAGCCCCTTGGCGAATTCGACACGTGGCGTCAGGCGTTGCCGATCACCCTGCTGGACGTAGTCAAACCC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGCGCGAAGAAACCGCCGAACAGCCTGCGCCACTGCGCAGTGGCCTGACCACTGGCAGCTGTGCGACCGCGACCAGCCTGGCGGCGGCGCGACTGCTGCT CTGCGGGCAGGTCAGCGACGCGGTAGACATCGTCCTGCCCAAGGGCAAACAGGTGCAGATGCGTCTGGAATTCTGCCGGCTTGTGGATAACTTCGCGGAA GCCGCAACGCTCAAGGATGCCGGCGACGATCCGGATGTCACCCACGGCGCACTGGTGTTTGCCCGCGTCAGGCTGCAAGCGGCAGCAGGCGTGCGCTTCG TTGCAGGTGCAGGTGTCGGCACCGTGACCCGCCCCGGGCTGGTGCTGGCAGTCGGTGAACCGGCCATCAACCCGGTGCCTCGGCGCATGATGACCGAGCA CTTGCTGCAACTGGCCGAAGAACAAGGCTACAGCGGCGGATTCGAAGTCACGATCGGCGTCGAGGGGGGCGAGGCGCTGGCGCTCAAGACCATGAACCCG
|
|
| Amino Acid Sequence |
>precorrin-6Y C5,15-methyltransferase
MSPWLTVVGIGEDGYKGLGKNARHALLHADQVFGGPRQLALLPPCIRAERRAWPSPFSLNPVLEQRGAEICVLASGDPMMFGVGASLARVVSIDEMRILP APSSYSLAAARLGWPLQDVVTLSVVARPVAALNAHFHHGMRLLVLSNDGSSPAVIAGLLRERGFGPSRMTVLEHLGGEAERRVEGLASEWGNPEIAALNL VAIDCRADASAIRLSPVSGLPDSAFEHDGQLTKRDVRAITLARLAPLPGELLWDVGAGCGSIGIEWMRAHPTCRAMAIEADEGRQQLIEFNREALGVPGL QLVRGSAPQALSGLERPDAIFIGGGVTRIGVLETCWEQLRPGGRLVANAVTLQSETALMAWRERHGGELTRIHVAHAQPLGEFDTWRQALPITLLDVVKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|