Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS21635
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig58, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTTCGCCGCTGCCTTTGAGGCTCGCCTCAAAAACGGTCACTTCCAGCGCTTTCAGGGTGCCGTCCGCCTGCGGGATGGCAGCCGAACCGACAAAGCTG TCGTCTTTGATTTGCTTGAAGTCAGCTTCGGACACAAGACGAATACCGGTCTTGTCAGTCAGCTTGATACTTTCGTGCTGACCCGAGCGAGTGGTGAAAT CGAGGGTGTCGGCGCTGACGCTGTCGACGGTCCCACGCATCGGTTTGACCACCTTCATGTCGGCAGCCTGGGTCATGACAGCGGCACTGAGCAACAGCAG GCCGAACGTAGTAGAGAGTGCAGTCTTCATCGGTACTTCCTTGGCAGGTGAGATCTGAAACCCATCTTTGCACCGCTACCGGCACCGCAGAATGACCGGG CAATGACATTTTTGTCATTCGTCGGACACCTTGTCGGCAACTCGTTAGACTCCGGCATCGGCGCACCATGGGTGCAGGCAAAAGCGTAGCGGACAAAACG
|
|
| DNA Sequence for Gene |
>P406_RS21635
ATGCATATCCTGCTGATTGAAGATGACACCAAAACCGGCGAGTACCTGAAGAAGGGTCTGGGTGAGTCCGGCTACAAGGTGGACTGGACCCAGCACGGGG CCGACGGCCTGCACCTGGCGCTGGAAAACCGCTATGACCTGATTGTGCTGGACGTGATGCTGCCGGGCATCGACGGCTGGCAAATCATCGAAGTACTGCG CGCCCGGCAGGACGTGCCAGTGCTGTTTCTGACCGCGCGCGACCAGTTGCAGGACCGGATTCGCGGCCTGGAGCTGGGCGCCGACGATTATCTGGTCAAG CCGTTTTCCTTCACCGAACTGCTGCTGCGCATCCGCACCATCCTGCGCCGGGGCGTGGTACGCGAGGCGGACCACTTTCATCTGGCCGACCTTGAGCTGG ACCTGCTGCGCCGCCGGGTGACGCGCCAGCAACAGGTCATTGTGCTGACCAACAAGGAGTTCGCTTTGCTGCACCTGTTATTGCGCCGCGAAGGCGACGT ACTGTCCAGGGCACAGATTGCCTCGGAAGTCTGGGACATGAATTTCGACAGCGACACCAATGTCGTGGACGTCGCCATCAAGCGCCTGCGCAGCAAGGTC GACCTGCCCTACCCGGTCAAGCTCATCCACACCGTGCGTGGCATCGGTTATGTGTGCGAGGTGCGCCCATGCGACGCCAGCCTTCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCTGCGTTCGACCCTGGCCTTTGCCCTGGTGGCGATGCTCACCGTCAGCGGCGCAGGCCTGTACCTGTATCAGTCCATCGAAGAAACGGTCATGCAACG CAGCGACCATGCCGTGCTCGCGCGGCTGGACCACTTTCGCAAGCTGCTGCGCTATGACCTGACCATGGACAACCTCAAGGGCAGCCCGCAGCTGTTCGAG AACATGCTCGACAGCGAAGAAGACATCTTCATCATCGGCGAACCGGGCAAGTCACCGGTGATATCGGTCAACCCGCAGCACGCGCCTCTGCCGGAGCTGC CGACCGTGGCGCAAGATCAGCCGCTGCGGGTCGACGACCTGCGCAGCGGCATGAGCCTGCAAGGCGTGCCGTTACGCGCTGCTGCCGTGCAGGTGATGTC CAACGGTGTCGAAGTACGTTTGCAGGCCGCGCACCTGATGGTCAAGGAAATGGCCATGCTCGCCAGCTTCCGTCAGCGCATCTATATAGCCGTGGCCCTG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MHILLIEDDTKTGEYLKKGLGESGYKVDWTQHGADGLHLALENRYDLIVLDVMLPGIDGWQIIEVLRARQDVPVLFLTARDQLQDRIRGLELGADDYLVK PFSFTELLLRIRTILRRGVVREADHFHLADLELDLLRRRVTRQQQVIVLTNKEFALLHLLLRREGDVLSRAQIASEVWDMNFDSDTNVVDVAIKRLRSKV DLPYPVKLIHTVRGIGYVCEVRPCDASLP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|