Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS21375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. coryli str. NCPPB 4273 contig56, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTTTCTGCCGACGATCGTGCGTAAAAACGGGTTTTTCGCACGAGGAGCATGCCTTTATGGCCTGAGAACTCAGACTGATCATGAGGTTTTTACTCTTTG AATTATTTTTGTGGTTGTAATTTTCTTCAAGTCTTATGTTGTCGTACAACATGATGCACTTATAGTCATTTGCCATTCCAGTGTCAAATGACAGAAACGC TCTGACCTGCATCAGGGATGGGTTAGCGCGGCGTCGGGAATGGGAGGCGCGCTTTAGCGTTATACGACGACTGCATAATCAGCGCCTGCTCATAGCTCGT TTCGGCCTATAGAGCGTCGCTCAGTGGTGACAGCGCGGACTATTTTCTGCGTAACGGCAAGAAACGCGTCCTGGCACTTGCACAACTGTCACAAATGCTT TCATTCTTGAAAGCGGCGTCAGGCAAGGGAAATGCCCGGTGAGACCTCATCGGCACGGGCCTGATGCTGAAGTCACCTCATGTCAGGAAGAGGCGTGTGC
DNA Sequence for Gene
>P406_RS21375
ATGCCCGAGCCAAGCAGTCTCGCCAGCTGGACCCCCGCTCTGCGCAAGCAGCTCACTGCCCTGGGTATGGACAGTGATGCGTTGTGCCAGAGCGCGGGTA TTGAACTGAACAGGCTGAGTGAGCCCGGTGCGCAGTTCTCGCCGGATGTCACCGCCACGCTCTGGCAACATGCAGTTCAGGCCAGCCTTGACCCGGCTCT GGGTCTACGTGTTTCACGCTTCGTCAGCCCCACAGCGTTTCATGCGCTGGGCTACACACTGGTGGCCAGCGGTTCGCTGCGTGAAGTTTTCGAGCGCATC GTACGTTACCGCTCGATGGCCGAGGACTCTCTGGAGCTGGACTTCAGAACAGTCGGCGAGCGTTATGAATTCCGCTTCGGTACACCACCCTCCTGCCAGT CACCGGTTCATGAACTGCTCGATGCATTTGCCGCGATTTACGTACGCACCTGCCGCAATCGGCTCGGCCGGGGCTATGCGCCGCTCGCCGTGCACCTGCA GCGTCCCGCACCCGAGGACCCGCGGCCCTGGCACGACCTGTTTCGCTCGCCGGTCATGTTTGCGGCGCAGGAGAACTTGCTGGAGTTTGGCGGTGATCAA TTCGACAGCCATCTGGATGACGGCCCGGTACAGCTAAACGGTCAGGAATCCCAAGGGGATCCGTTACCGTCACTGATTTGGGAGCAGCGCGTACGCTCCG CCATCGAGACCCTGCTGCCGGACGGCGAGCCCACCGTCAGAAGCATTGCCGAAGCCCTGCACCTGAGCCCGCGCAACCTGCAGCGCCATCTGGCCGACGA GGGCTGCTGCTATGACCTGCTGCTCAATCAGTGCCGCCAGAACCTGGCGCTTTTGCATATGAACGATCAGCAAAGCTCGCTGAGCGAAATCGCCTACCTG CTGGGTTTTTCCGACACCGACTGCCTGAGCCGCGCCTTCAAACGCTGGACCGGGCTGACACCGGAACAATACCGCAGCGCCGTGGTGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGAGGACACACCATCGTGCCCATGCTCAGCGTCCACTCTTGATCAAGCGGCGCAGCGCAGATGTGTGACGCGGAGCGTCACGAAGAGCATTCCCACGCT GGAGCGTGAGGAACGATCGGTGTCTGGAGGATCGCGAGCGTAACGTGCCCGCAAGAACACCATCGTACCCATGCTCCGCGTGGGTATGCCGTTCTGGACG CTCTGCGTCCTCTCCTGATTATGTGACGCAGAGCGTCACTCAAGGCATTCCGACGCTGGAGCGTGCGGAACGATAGGTGTCTGGGGGATCGCGAGCGTAA CGTGCCCGCAAGAACACCTCGTACCCATGCTCCGCGTGGGTATGCCGTTCTAGACGCTCTGCGTCCTCTCCTGATTATGTGACGCAGAGCGTCACTCAAG GCATTCCTACGCTGGAGCGTGCGGAGCAATAGTGCTCTCAAGAACACCGTCGCGCCTGGGCTCCGCGTAGGTATGTCTTGGCTTCTAGCGTGCTTCGATC
Amino Acid Sequence
>AraC family transcriptional regulator
MPEPSSLASWTPALRKQLTALGMDSDALCQSAGIELNRLSEPGAQFSPDVTATLWQHAVQASLDPALGLRVSRFVSPTAFHALGYTLVASGSLREVFERI VRYRSMAEDSLELDFRTVGERYEFRFGTPPSCQSPVHELLDAFAAIYVRTCRNRLGRGYAPLAVHLQRPAPEDPRPWHDLFRSPVMFAAQENLLEFGGDQ FDSHLDDGPVQLNGQESQGDPLPSLIWEQRVRSAIETLLPDGEPTVRSIAEALHLSPRNLQRHLADEGCCYDLLLNQCRQNLALLHMNDQQSSLSEIAYL LGFSDTDCLSRAFKRWTGLTPEQYRSAVVR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site