Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig43, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCATGCGCAGCGTCGATGGCTACAGCCTGCCGGTTTCCAAGGTCTATCTCGACCAGATGGCCGCGGCACTGGTGATCCGCCAGAGCTTCTTCGCCGACA ACCCGGCCGAGCCGCAGGTGCAGTTCAAGCTGGAGCCTTACACCCTTGACCCGTCTGTCAGTCGCTCCGAGTTCAAGTTTGGCGACAAGACCATTGAATA CCGTCACGGTCCGATCGTACCGGTGTCCTTCAAATGGCCTACAGATGCGGAAGACGGTCGCACCAGTCTGGTACTCGACAGAATGGTGGGTCGTCCGCTG GGGCTTGAGAAGAATACCGGTCCATGGTCGCTGTTCCGTCTGTTCGACCTGATGCAGACCGAATACCTGACCGGGCGCGACGTGTTGGTGCTCAAGGCTG ACGTGGGTGGTTTGCGCGCCAACTACCTGTTGACCAGCCAGCGTACGCCGAACCCGTTTGACATGGGCGCACTGCGCACCTTCCGTATGCCGGGGCAGCT
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DNA Sequence for Gene |
>P406_RS18110
TTGATGCTGGCCAGCCCTTGGCGCAGCGCTGCGCGCACCGATGCCGGCAAGGTACGGGCGCGTAACGAAGATGCTTTTCTGGATTCCCCGCAGCATGGGC TGTGGGTGGTCGCGGATGGCATGGGCGGTCATCAGGGTGGCGATGTTGCCAGTCAGTTGATCGTCGCCAGCCTGGCGGAACTGCCTGTGCAGGAAGGCTT TGACGAACGCCTCAAGGGCATTCGTCAATGTCTGCACTGGCTCAACCGCCGTCTGGGTCAGGAATTGACAGTCACCGCGGGTCGCCATGACAGCATCATG GGCAGCACGGTAGTGGCGCTGATGGTTGAGGGCAATCGCGCCGCCTGTATCTGGGCGGGCGATAGCCGTTGTTACTTATGGCGCGGACAGCGTCTGTACC AGCTGTCCAAAGACCACTCGCTGCAACAGCAACTGATCGACGAGGAGAAAATGAGCGTCGAACAGGCCAGAGCTCATCCTTCCGCGCACGCCTTGACGCG CGCGGTCGGTGCGGCAGAACAGTTGACCCTGGATGTATTGGAGCTTGAGGTATATCCCGGCGACGCATTTTTGCTGTGCAGCGATGGCCTGTATCAGGGA CTTGGCAGCGATGCACTCGGTAGCGCCTTGAGCCTGACCGCGCCACAGGTGGCGCTGGAGCGCTTGTTCGATGGCGCCTTGCGTGGTTCTGCGCGAGACA ATCTGACGGCCGTGGTGATCCGCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGAACTCATGCGCCCGAACGACGACCTGCCGGTGAGCGAAGAGCAGGACAGCAACCTGACCTACTTCGCGTTTGCCAAATCACACAAGGCCGAATCTGT GCTGGCGCCGACCAAGGCCAGTATCGGTGAGATGCCCGACGTGCTGGCAGGTCGTTATCGTATCGAGCGACTACTCGGTGCCGGTGGCATGGGCGCGGTC TACCGGGCCAAGGACTTGCTGAGCGAACAGTTCGGCGAGCCTGATCCTTATGTTGCGCTGAAAATTCTCAGCGAAGAATTTGCCGAGTCGCCGGATGCAA GCGCCTTGCTTTACAGCGAGTTCGCCCTGACCCGACGCCTTCGTCACAACAACGTGCTGCGCTTGCACACGTTCGAAGTGGACACTAACTGCCAGCGGGC CTTCATCACCATGGAGCTCATGCGTGGGTTGACCTTGGACAAACTGCTATGCGAACGGCCTTTGGGCCTGCCGTGGAAAGAATTGCGTGACATTGCACTG
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Amino Acid Sequence |
>protein phosphatase
MMLASPWRSAARTDAGKVRARNEDAFLDSPQHGLWVVADGMGGHQGGDVASQLIVASLAELPVQEGFDERLKGIRQCLHWLNRRLGQELTVTAGRHDSIM GSTVVALMVEGNRAACIWAGDSRCYLWRGQRLYQLSKDHSLQQQLIDEEKMSVEQARAHPSAHALTRAVGAAEQLTLDVLELEVYPGDAFLLCSDGLYQG LGSDALGSALSLTAPQVALERLFDGALRGSARDNLTAVVIRK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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