Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS00450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTGGGTGTGCTCTATGAAAGCTTCGTGCACCCGCTGACCATCATCTCCACCCTGCCCTCGGCAGGTATCGGCGCACTGTTGCTGCTGTGGATGATGGGC CAGGACTTCTCGATCATGGCTTTGATCGGCGTGGTGCTGCTGATCGGTATCGTCAAAAAGAACGGTATTCTGCTGGTGGACTTTGCCCTGCAGGCACAGC GCGAGCAGGGCCTCACGCCCCACGAAGCCATTTATGAGGCCTGCATCACCCGCTTCCGACCGATTATCATGACCACCCTCGCCGCGCTGCTCGGCGCGCT GCCGCTGATGCTCGGTTTCGGCGTCGGTTCCGAGTTGCGTCAGCCGCTGGGCATTGCCGTGGTCGGCGGCCTGCTGGTGAGCCAGATGCTCACGTTGTTC ACCACGCCGGTCATTTATCTGCAACTGGAGCGGCTGTTTCATCGACGTCACCCGGCGCCCGACGCACCGGCGCTGGCCCTGCACAAGTGAGAGTCGCCCG
|
|
| DNA Sequence for Gene |
>P406_RS00450
ATGCGCGTGCTGATTATCGAAGACGAAGAAAAAACCGCCGATTACCTGCGTCGCGGCCTGACCGAACAGGGCTATGCCGTGGACGTGGCGCGCGACGGGA TCGAGGGCCTGCACCTGGCGCTGGAGAATGACCATGCGATCGTGATTCTCGACGTGATGCTGCCGGGTCTGGATGGTTTTGGTGTATTGCGTGCGTTGCG CGCACGCAAACAGACGCCCGTGATCATGCTGACCGCGCGCGAGCAGGTCGACGACCGCATTCGCGGCCTGCGCGAAGGCGCGGATGATTACCTGGGCAAA CCGTTTTCCTTTCTGGAACTGGTCGCCCGCCTGCAGGCCCTGACCCGGCGCAGCGGTGGCCACGAACCGGTGCAGATCACCATCGCCGACCTGTGGATAG ACCTGATCAGCCGCAAGGCGACCCGCGCCGGACTGCGCCTGGACCTGACCGCCAAGGAGTTTTCGCTGCTCAGCGTGCTGGCCCGGCGTCAGGGCGACAT TCTCTCCAAGACGTCCATCGCCGAGATGGTCTGGGACATCAACTTCGACAGCGATACCAATGTGGTCGAAGTCGCGATCAAGCGCTTGCGGGCCAAGCTC GATGGCCCTCACGAACACAAGCTGCTGCACACCATTCGCGGCATGGGCTATGTGCTGGAGAACCGCAGTGCGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCGATTGCCCTGCGCCTGAGCGGACTGTTCGCGCTGGTGGCACTGGTGGTCTTCCTGCTGATCGGCTGGGCCCTGTACCTGCAGGTCGACAAGAGCCTC GACTTGCTGCCCCGCGCGGAAGTGGATGCGCGCTACAGCGTGCTGGAATCGGCGGTCAATCGTTTCGGCAACCCGGAGCACTGGGGCAAGATCAAGACCA AGCTCACCTTGCTCAGCGAAGAGGATAAACGCCTGCGCTTCTGGGTGGTGAGTGATAATCCGCTCTACGAGTTCGGCGACCCTGGCGCTGACATTCGCCG TTTTGCGCAGGGGCCGCTGGGCATGCACGACCTGAAACTGGCGGATCACCCGTTTTCGTTCAAAGTGCTGGTCAGCGAGTTTCCCGCCAAGGAACAGCGT CCGGCACTGCGCTTTCTGACCGCCATCGACACCGAGACGTTCTGGCACACGCAGCACTCGCTGCTGGTCGCCTTGATCAGCCTCGCCACGCTGGGCATTC
|
|
| Amino Acid Sequence |
>transcriptional regulator
MRVLIIEDEEKTADYLRRGLTEQGYAVDVARDGIEGLHLALENDHAIVILDVMLPGLDGFGVLRALRARKQTPVIMLTAREQVDDRIRGLREGADDYLGK PFSFLELVARLQALTRRSGGHEPVQITIADLWIDLISRKATRAGLRLDLTAKEFSLLSVLARRQGDILSKTSIAEMVWDINFDSDTNVVEVAIKRLRAKL DGPHEHKLLHTIRGMGYVLENRSAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|