Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS09575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. coryli str. NCPPB 4273 contig19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCGATGGCGCGTACCCCTGAAGAACTGTCCAAGAAATTTCGTTACAACCAGCGTCGTGAGCTTCGCTTGCTCGAAGAGGCCGGCGGTACGGTAAGGC CTGTCAGCGAGTTCAGCAGCACCGAACTGGCGAGTATGTACTGCGATCTGTTTCAGCGTCGCTGGGGCTTCGAAGCGACCGGTGCCCGGCACAAGGCCGA AGTCATCGAACTGTTGCGCGAGCTGCTGATCGGTTCGGTGGTGTTTCTCAACGATGCGCCGATTGCCATTCAACTGGTGTATCGCGTCGAAGCGCCGCAG TGGGTCAGCATCGAGTACGTCAACGGCGGTGTCGATCCCGAAACCCGTGATTTCAGCCCGGGCAGCGTGCTCAGCTTCGTCAATACCCAGTCCGCCTGGG AGAACGCCCGCGCGCTGGGCAAATCACTGCGTTTTTCCTTCGGTCGTGCCGACCGCGAGTACAAGGACCGATGGTGCAACCCCGTTCCGGTGTTCCAGAT
DNA Sequence for Gene
>P406_RS09575
TTGAGTCGCAAGCAGCAATTGCTCAAACGCCATCGCCGTAACAAGCGGCTGGCGTTGCTGGGTGGGCTGCTCCTGTTGATCGCGGTGGGCGTGCTGGTGG CCTGGTGGCTGGCGCCGCTGCTGGCCGTGTGTGCCTGGGTCGCTCATGAGGCCTGGTTCGCCGATCATCTGTTCTATTCGCCGTCTGACGACTATCAGTA CACCTTCGCTGCCGACAGCGAAGTGCCGGGCGTGCGCCTGGATGGCGGCACGTTGCTGATCGACCCCGCTGTGCAACTGAACGGCGACGAGACGCTGATA TTGGCGCTGACGGTCAAAAGCACCTGGCTCGGGCGTTTTCTCGACCCTGTGGTCGAGCTGCAAGGTCAGGGCCTCAACGACCAGCAGGCATTCGAGCGCG GCGTCAGCGGTGTGCGTTATCTGAACCTGACCGGGCTGGGCGAGCCGCTGGCCGCAGGTGTGCTGAAACTGCGCGGGCGTTGCTGCCGTCTGGCCGGCAC GCCGCGGCTCTGGCTGTTTCGTCAGCCGGATGCGCGAAAACAGCGTGTCATGGTCATCGCACCGCACGCCGACGATGCCGAGCTGGCCGCCTTCGGGCTG TACAGCCAGGCCGAGGAAGCGTGGATCATCACGCTGACCGCCGGTGAGATCGAGGCCGAGCATTATCGGCAGATGGGCATGGAGCGCGCCGAAGCTGCGC GCATGAAAGGCCGCTTGCGGGCCTGGGACAGTATCGCCGTGGCGCGCTGGGGCGGGGTGCCCGAGTCGCAGTGTGTGCAATTGGGCTATTTCTGCCTGCA ACTGCCCGCCATGCAGGCTGCGCCGGATACGCCGATTGGTTCGCGCGAGGCGGATCTGACCGATACCCGCCTGTTCCGTCAGTTCAATACCCTGCCATTG CCCGGCGACAACGGCCAGCCGACCTGGAATAACCTGCTCGCCGACCTGCGCGCGCTGATTCTCAAGGCCCGGCCGCAGGTTGTGGTGATGCCGCATCCTG CCATCGACCCTCATCCCGATCACATCTGCGCCCAGGCTGCGGTGCGTGAAGCCCTGTTCGGGCTCGAATGGCAGCCGGACGTGGTGCTCGGTTATGCCAA TCACCTGCACGACAACGACCGCTGGCCGATGGGCGATGCCTACAGCGGCATCAGCCTGCCGCCGGTATTCGATGCCACGCTGCCGCTGGTGCCGTACAGC CTTCAATTGTCGGTCGCCGCGCAACGCGACAAGGCCATGGCGCTGGGGATGATGCATGACCTGCTGCCGCCGATGCCGTTCAAGCGCCGTGTGCGCCGTG CGCTGCAGCGCGTTCTGGCCGGTCGCCACTGGCCGGCCGAGGGCGAAAACGAATTCTTCCGCAAGGCGGTGCGACGACACGAGTTGTTCTGGTGCAGCCG TGATCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGCAGGCGCAGTACTGCAAGGAAAACCATGAAAGTTCTACTGCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCGTCTCTACGACGGCATCGCCG CACATTGTGAATGCGAAGTGCGCTGGCTGAGCTCTGCGGAGCAACGCAACCTGCGTGGTTATTTCCGCCGTGAGGTGGACGTCAGCCGCTATGACCGGAT CGTGTTTTTCCTGCGTTTCAAGCAGGAAGTGCGTCAGGTCGGCTTCATCCGCACGATTCCCAATCTGGTCATCCTCGAACACGATGCCTACCAGAACTAC ATTCCGTGCAAATACACCGGCAAGTTCAGCGCGCACTACCGCAAGCTGCCCTGGGCGCGGGTGATCTGTTCGGGGTTCATGGTCAGCGAGCGTCTGCGTC AGGAAGGCTTCGATGCGGTGTTCGTGCCCAAGGGCTATGACCAGAGCCTGCTGCAGTTGCAGGCACGCGAGCGTGACATCGAACTGGCCTTCGTGGGCAG
Amino Acid Sequence
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPLLAVCAWVAHEAWFADHLFYSPSDDYQYTFAADSEVPGVRLDGGTLLIDPAVQLNGDETLI LALTVKSTWLGRFLDPVVELQGQGLNDQQAFERGVSGVRYLNLTGLGEPLAAGVLKLRGRCCRLAGTPRLWLFRQPDARKQRVMVIAPHADDAELAAFGL YSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLRAWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPIGSREADLTDTRLFRQFNTLPL PGDNGQPTWNNLLADLRALILKARPQVVVMPHPAIDPHPDHICAQAAVREALFGLEWQPDVVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYS LQLSVAAQRDKAMALGMMHDLLPPMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site