Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS09375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig19, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGTGATGCCGGACGAGGGTTTGCCGTGGTGGCTGACGAAGTACAGCGGCTGGCCGAGCGTTCGTCGTCTGCGACCAAGCAGATCGAAACGCTGGTCC GGGCCATCCAGAACGACACCAACGAGGCGGTTATCTCCATGGAGCAGACCACCAGCGAAGTGGTGCGCGGCGCACGCCTGGCGCAGGACGCCGGGGTGGC GCTGGGGGAAATCGAAGGGGTGTCCAGGGTGCTGGCCGAGCTGATCGAAAGTATCACCGATGCCGCCCACCAACAGGCCGAGTCTGCCGGGCAGATTTCG CAGATCATGACCGTCATTCAGCAGACCACATCGCAGACCACCTCGGGCACCTCGGCCACCGCTGAAAGCATCGGGAATCTGGCGAAGATGGCCAGCGAAA TGCGCCGCTCGGTATCGGGCTTTGCCCTGCCGTCATCGAAAAAAGCCGGATGATGTGCCGCTCATGAACAACCTTGATTGGGTAACGGACGGTACTCGTC
|
|
| DNA Sequence for Gene |
>P406_RS09375
ATGGCTGATCGTCACGATTACGTTGCTCTTGAGTGGCTGAAGGGCGAGATCGCCGAAACGTTGCGCCAGGCCCGTCAGTCGCTGGACCTGTTCATCGAAG ACCCGGCCAACGCTGCGGCGATGGCCGAGTGCCTGAACCTGGTGCATCAGGTTCACGGCAGTCTGCAGATGATCGAGTTCTACGGCGCCGCGTTGCTGGC CGAGGAAATCGAGCAACTGGCGCTGGCGGTCCAGCAGAACCGTGTCAGCCATCCGATCGAGTCCGAGCAACTGCTGATCCAGGCCATGAGTCAGTTGCCG GTTTACCTGGAGCGCATTCATTCCGCGCGCCGCGACCTGCCGCTCGTGGTCTTGCCACTGCTCAATGACCTGCGTAGCGCGCGGGGCGAAAGTCTGCTCT CGGAAACCAGCCTGTTCGCCCCGCAGCTGGTCGTCGTGCCGGCGCTTGATGAAGAGGAGCTGGCGCGGCGCAATACCCCGGAATTGCCCAACCTGCTGCG CAAGCTGCGCCAGACCCTGCAGGCGGCGCTGGCCGGCCTGATGCGCGAGCAGGGCGTGCAGACCCAGCTCGGTTACATGGCCAAGGTGTTTGCCCGGCTT GAGCAGTTGTGCGAAGACGCGCCGCTCGGTGCGCTTTGGCGGATCGCCTCGGCCCTGGTTGAAACCATGCTCAACGGCAACTTCACCAACAGCCCGGCGC TGCGCAGCCTGTTGAAGGACGCCGACAAGGAACTCAAGCGGCTGGCCGAGCAGGGCGTCATCGGCATCAATCAGCCCGCCCCCGAAGAGCTGTTGAAAAG CCTGCTGTTCTACATCGCCAAGTCCGACAGCCTGGCGCCGAAGATGCTCGACCTCAAGGACCAGTACGCGCTGGCCGATGCCTTGCCCGGCAACGACGTG GTCAACGAAGAGCGCGCCCGCATGGCCGGTCCGGACCGAGACGCCATGCGTTCGGTGATCGTGGCCTTGTGCGAAGGGCTGGTCAGGGTCAAGGAACGGC TCGACGTGTTCGTGCGCGGCGACCGTCAGCATGTCAGCGAGCTCAACGCGTTGCTGCCGCCGTTGCGGCAGATTGCCGATACCCTGGCGGTTCTGGGTTT CGGCCAGCCGCGCAAGGTGATCATCGATCAGTTGTCTGTGGTCCTCGGTCTGGCGCAGGGGCAGCGCGAGCCTAGCGACGCTGCGCTGATGGATGTCGCG GGTGCCTTGCTCTACGTCGAATCGACCCTTGCCGGCATGGCCGGGAGCCACGAGCAGGTCAGCCGCGAAGAAAGCCGCCTGCCGACCACCGACCTGACGC AGATTCATCAACTGGTGATTCGCGAAGCCCGCACGGTGTTGCAGCAGGCCAAGGACGTGATCCTCGATTACATCGACGGCGAGTGGGACCGACAGCGGCT CGATCCGCTGTGCGCGCTGATCGTGCAGGTTCGGGGTGCGCTGGCCATGATCCCGCTGGCCCGTGCGGCCAGCCTGCTGGCCGCCTGCAACGAATACATT CAGGAACACCTGCTGGTGGACGAAACCCGTCCCACCTGGGTTCAGCTCGATTGCCTGGCCGACACCATCACCGGCATCGAATATTACCTGGAGCGCATGC TCGAAGACCATCAGGCGCCGGGCGACCAGGTGCTGGACATGGCCCAGCAAAGCCTGGCACGGCTGGGCTATACGCCCGCTGCGGACACCCTCGAAGTGCC GTTGCTCGAAGAGATCATCACTCAGGACGAGTTGCTCGAACTGGATGACCGCAAGGCGCTGGTCAGCCCCACGCAAACCATTGCCCAGGTCCTCGCCAGC CCGGTCTCGGCGGTCAACCCGCCCGCCCGTAACGTACCCACCAGCCTGTTGCCGCCCTCGGCCGGGGAAGAGGCGGTGGACGAAGAGTTGCGCGATGTGT TTCTCGAAGAGGCCGACGAGGTGCTCGACGCGCTGCGTGAGTACCTGCCGCGCTGGTTCGCCTCGCTCGGCCGCGACGGCCACTGGGACAGCACGGCGCT GACCGAAGTGCGCCGTGCGTTTCATACCCTCAAGGGCAGCGGCCGGATGGTGCGTGCGCTGATCCTCAGCGAGCTGGCCTGGTCGGTGGAGAACCTGCTC AACCGGGTGCTGGAAGGCGATGTAATGCCGGGCCTCGAAGTCCAGCAACTGATGAGCGAAGTGCAGGCGCTGCTGCCGTCGGTCATCCGCGACTTTGCCG AAGATGCGCAGCGCCAGCGCGACGATGTCGACCTGTTGGCGGCTCGCGCCCATGCGTTGGCCAACGGGCTGGAGCCACCGACGCTGTCGGCCGTGGATGA CCCTGCGCCAGGCAAGCCTGTTGCCGACGAACCGCTCGATCCACAGTTGCTGGAGATTTTCCGGCAGGAAGCGCTCGGCCATCTGAACACCCTCGGTCGC TTCCTCGACAACGCCGAACAAGCAGCGTCGCCGGCGATCAGCGACGCGGTGCTGCGTGCGCTGCATACGCTCAAGGGCAGCGCGCACATGGCCGGGGTGC TGCCGATTGCCGAACTGGCCAGCCCGCTCGACCAGTTAGTGCGTGAATACAAGGCCAACCTCATCGATATCGGTTCACCGGAGCTCGTCCTGCTGCGCAG CGCCGAACCGTTGCTGCACAAGGGCCTCGAACAACTGGACAGCACGCCGCTGGCGGATATTCCGGGTGCCGCGCCGCTGATCGAGGCTGCCCTGGCGATG CTCAACGACCGCCTCACCGTGGTGCTGCGCGAGTCGGACAGCGGCCTGCGGATCAAGCGCAACCCCACGCTGCTCGCCGGTTTTCTGGCCGAGGGCATGG ACATCGTGCTGGACGCGGAGAACCTGCTGCAGCGCTGGCGGCAGCACCCCGGCGAACGCCAGGAACTGAGCGCGCTGCTCGACGAACTGACCACCCTCGG TCATGGCGCGCACCTGGCCGACCTGCCGCAGGTTGATGAGCTGTGCGAAGCCTTGCTCGACCTCTACGGCGCGGTCGAGGAAAGCAGTCTGGCGGTCAGC GAGCGGTTTTTTGATGTTGCAGAAAATGCTCACGAAGCGCTGATCAACATGCTTGATCAGGTGGCTGCCGGTCAGGATGTCGAGCCACGTCCCGAATGCG TGCGCGCCTTGAACCAGTTGCTGGATCAGGCGCTTGATCCGTCGGCGACCGGGCTGGTCAAGAGCGACGGCCACCGCACCTTGAGCGTTACCGAGCTCAA CGCCGCCACCGCGCAGCTGGCCAGCGAGGCCGGGCACACTGAGACTGAAGTTGCCGGGCCGGACGACGAAATCGTCGAGATATTTCTGGAAGAGGCCGTC GATATCCTCGACAGCGCCGGCCAAGCCTTGCAGCGTTGGCTGGCCGATCCGGAAAACCCTGCGCCGCTGGCCTCCTTGCAGCGCGACCTGCACACCCTCA AGGGCGGTGCGCGGATGGCTGAGGTGGCCGAGGTGGGCGATCTGGCCCACGAACTGGAAAACCTCTACGAAGGCTTGATCGACCGGCGCTTCAACCATTC GCCGGCGCTGGCCGAGCTGCTGCACGAGAGCCACGACCATCTGGCGATTATGCTCGAGCAACTGTATCGGCAGGAAGCGCTCAGCGACCCTTCGGCCTTG ATCGACGCGCTGCGCAACTGCCGCACGCTCGAGAGCGCCGGACCCGAGGTGCAAGCCTCGCCTGCCGCCAGTGAAGATCTTCCCGAACATGACACCGAGC TGCGTGAAGTCTTCCTCGAGGAAGGTTTCGACATCATGGAAAGCTCGGGCGCGGCATTGGCGCGTTGGCAGGCCGATCCGCACAACATGCTGGAAGTCGA AAACCTGCTGCGCGACCTGCACACCCTCAAGGGCGGCGCGCGGATGGTGGAAATTGCTCCGATAGGCGATCTGGCCCACGAGCTGGAGACGCTTTACGAG GGGCTTTCCGCCGGCAGCCTGCAGCCCGCGCCGTTGATGATGGGGCTGTTGCAGAGCGGTCAGGATGTGCTGGCCGACATGCTCGATGCCGTGCGCAGTG ACAAGCCGCTGCCTGACGCGACCTTGCTGATTGAGAGCATTCGCAGACTGGCCACCGACGAGCCGTCGGGCGCTGTGCTGGCTGCGCAGGACCTGGAGGT CCATCCGGAGTCGGTGGTCGCCGTGGCCCCGGTCGCCGAAGGGGAGGCCGAGCGCAGCGGTCCGGAAATGGTCAAGGTGCCTGCCGAGCAACTGGAAGAC CTGGTCAACCTGGCCGGCGAAACCTCCATCTTTCGTGGACGTATCGAACAGCAGATTATTGATTCACAGATCGCTCTGGTAGAGATGGAAACCACCATCG AGCGGATGCGCGATCAGTTGCGTCGTCTGGACATGGAAACCCAGGGGCGCATTCTCAGCCGTGAGCAGGTCCAGGCCGAGCGACTGGGCTATGAAGAGTT CGACCCGCTGGAAATGGACCGTCATTCGCAGTTGCAGCAGTTGTCACGCGCGTTGTTCGAATCGGCGTCCGACCTCATGGACCTCAAGGAAACCCTCGGT GCGCGCGCTCGCGACGCGGAAACGCTGCTGTCGCAACAGGCCAGGGTCAACACTCAGCTTCAGGAAGGCCTGATGCGTACGCGCATGGTGCCGTTCGAAC GGTTGGTGCCGCGCCTGCGTCGCGTGGTGCGCCAGGTGGCCTCGGAACTGCACAAGAAAGTCCATTTCGAAGTGGGCAACGCCGACGGTGAAATGGACCG CAACGTGCTGGAGCGAATGGTCGCGCCACTGGAGCACATGCTGCGCAACGCCGTCGATCACGGGCTTGAAAGCACCGAAAAACGCATCGCTGTCGGCAAG CCGGAACAGGGCCATATCAGTCTGGAGCTGATGTACGAAGGCGGCGATATGGTCATCGAACTGAGCGATGACGGCTCTGGCGTTGACCTTGCTGCAGTAC GTCGCAAGGCCATCAAGCGCGGCATGATCCATCCGGATGCCGATCTGTCCGACCATGAAGTGTTGCCGTTCATCCTGCAGGCGGGGTTTTCCACCAGCGA GATCATCACCCAGATTTCCGGCCGTGGCGTGGGCATGGATGTGGTGCACGCCGAGGTCAAGCAACTGGGCGGTTCGATGGTCATCGACTCGGTACCGGGC CAGGGCACGCGCTTCCGTATCCGTCTGCCGATTTCGGTGTCGGTCAACCGCGCGTTGATGGTCACGTGCGGCGAAGAACAGTATGCGGTACCGCTCAATA CCGTCGATGGCATCGTGCGCGTCATGGCCAATGAGCTGGACGGCTATTACCAGACCACCCCGCCGCGCTATCAATATGGCGGGCGCAGTTACGAATTGCG TTATCTGGGCGAGTTGCTGGGCAGCAGTCCGCCCAGGCTGGCCGGGCAATTGCAGCCGCTGCCAGTGTTGCTGGTGCATCTGCAGGATCAGTGGGTGGCG GTGCAGGTCGATGCGCTGGCAGGCTCGCGCGAGATCGTGGTCAAGAGCCTGGGTACGCAGTTCTCCAGGGTGCAGGGCATTTCCGGGGCGACCATTCTGG GTGACGGCCGCGTGGTGCTGATTCTTGATCTGATGGCGCAGATTCGTACCTTGCAGGGCTTGCCTTTCAGAGGGTTGGCACCTGCCTACCACGAAGCCGA GCATGCCAGACCGTTGCTGGTGATGGTGGTGGACGATTCGGTGACGGTGCGTAAAGTTACCAGCCGCTTGCTGGAACGCCACGGCATGCATGTGCTGACC GCCAAGGACGGTGTCGATGCCATGACCCTGTTGCAGGAGCACACGCCTGACATCATGCTGCTCGATATCGAAATGCCGCGCATGGACGGCTTTGAAGTGG CCAGCCAGATCCGCCAGGACGAACAGCTCAAGGACCTGCCTATCATCATGATCACCTCCCGCTCGGGCCAGAAGCATCGCGATCGGGCGATGGCAGTGGG CGTCAACGAGTACCTGAGCAAGCCGTATCAGGAAAACGTGTTGCTGGAGAGCATCGCTTACTGGAGCCAGGTGCATGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGTACGTTCCAGACCAGCCGTCTGACCAGCCTGACTGGCTTGCTGGTGCCGTTGAGTGACCGGCATCTGCTGCTGCCCAATGTCGCGGTCGCCGAGTTG ATCGATTACCAGGATTGCAGCGCAGAGCCGGACGCCCCCGAGTGGTATCTGGGGCCGATCAGCTGGCGCGAACTGACCTTGCCGCTGCTCAGCTTCGAAG CCGCCTGCGGAGGCCGCACCCGCGTTGGCGGTCGAGCCCGGATCGTGGTGCTCAACGCGCTGGGCGGACGCAACGACGTCAGGTTCATCGCCCTGCTGAC CCAGGGCATCCCGCGTTCGTGCAAGGTCGACAGCCAGTTGAGCTACGTCGACGTCCCGCTAGCCGAACTGGAACTGGCCGCCGTACAGATCGGCGAAACC GTAGCCCGCATTCCCGACCTCGAAGGGCTGGAGCAATGGCTGGTGGATGCAGGGCTGTCATAGTTAAAGAGGACGCGGAGCGTCCAGAACTGCATGCGAC
|
|
| Amino Acid Sequence |
>histidine kinase
MADRHDYVALEWLKGEIAETLRQARQSLDLFIEDPANAAAMAECLNLVHQVHGSLQMIEFYGAALLAEEIEQLALAVQQNRVSHPIESEQLLIQAMSQLP VYLERIHSARRDLPLVVLPLLNDLRSARGESLLSETSLFAPQLVVVPALDEEELARRNTPELPNLLRKLRQTLQAALAGLMREQGVQTQLGYMAKVFARL EQLCEDAPLGALWRIASALVETMLNGNFTNSPALRSLLKDADKELKRLAEQGVIGINQPAPEELLKSLLFYIAKSDSLAPKMLDLKDQYALADALPGNDV VNEERARMAGPDRDAMRSVIVALCEGLVRVKERLDVFVRGDRQHVSELNALLPPLRQIADTLAVLGFGQPRKVIIDQLSVVLGLAQGQREPSDAALMDVA GALLYVESTLAGMAGSHEQVSREESRLPTTDLTQIHQLVIREARTVLQQAKDVILDYIDGEWDRQRLDPLCALIVQVRGALAMIPLARAASLLAACNEYI QEHLLVDETRPTWVQLDCLADTITGIEYYLERMLEDHQAPGDQVLDMAQQSLARLGYTPAADTLEVPLLEEIITQDELLELDDRKALVSPTQTIAQVLAS PVSAVNPPARNVPTSLLPPSAGEEAVDEELRDVFLEEADEVLDALREYLPRWFASLGRDGHWDSTALTEVRRAFHTLKGSGRMVRALILSELAWSVENLL NRVLEGDVMPGLEVQQLMSEVQALLPSVIRDFAEDAQRQRDDVDLLAARAHALANGLEPPTLSAVDDPAPGKPVADEPLDPQLLEIFRQEALGHLNTLGR FLDNAEQAASPAISDAVLRALHTLKGSAHMAGVLPIAELASPLDQLVREYKANLIDIGSPELVLLRSAEPLLHKGLEQLDSTPLADIPGAAPLIEAALAM LNDRLTVVLRESDSGLRIKRNPTLLAGFLAEGMDIVLDAENLLQRWRQHPGERQELSALLDELTTLGHGAHLADLPQVDELCEALLDLYGAVEESSLAVS ERFFDVAENAHEALINMLDQVAAGQDVEPRPECVRALNQLLDQALDPSATGLVKSDGHRTLSVTELNAATAQLASEAGHTETEVAGPDDEIVEIFLEEAV DILDSAGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGDLAHELENLYEGLIDRRFNHSPALAELLHESHDHLAIMLEQLYRQEALSDPSAL IDALRNCRTLESAGPEVQASPAASEDLPEHDTELREVFLEEGFDIMESSGAALARWQADPHNMLEVENLLRDLHTLKGGARMVEIAPIGDLAHELETLYE GLSAGSLQPAPLMMGLLQSGQDVLADMLDAVRSDKPLPDATLLIESIRRLATDEPSGAVLAAQDLEVHPESVVAVAPVAEGEAERSGPEMVKVPAEQLED LVNLAGETSIFRGRIEQQIIDSQIALVEMETTIERMRDQLRRLDMETQGRILSREQVQAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLMDLKETLG ARARDAETLLSQQARVNTQLQEGLMRTRMVPFERLVPRLRRVVRQVASELHKKVHFEVGNADGEMDRNVLERMVAPLEHMLRNAVDHGLESTEKRIAVGK PEQGHISLELMYEGGDMVIELSDDGSGVDLAAVRRKAIKRGMIHPDADLSDHEVLPFILQAGFSTSEIITQISGRGVGMDVVHAEVKQLGGSMVIDSVPG QGTRFRIRLPISVSVNRALMVTCGEEQYAVPLNTVDGIVRVMANELDGYYQTTPPRYQYGGRSYELRYLGELLGSSPPRLAGQLQPLPVLLVHLQDQWVA VQVDALAGSREIVVKSLGTQFSRVQGISGATILGDGRVVLILDLMAQIRTLQGLPFRGLAPAYHEAEHARPLLVMVVDDSVTVRKVTSRLLERHGMHVLT AKDGVDAMTLLQEHTPDIMLLDIEMPRMDGFEVASQIRQDEQLKDLPIIMITSRSGQKHRDRAMAVGVNEYLSKPYQENVLLESIAYWSQVHV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|