Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCAGAATGCGCAAAAATTCGCTGCGGCGATGGAAGAGCAGCTATGGAACAACACGCCTCCGCCCTGAAAGTCATGGTCATCGATGATTCGAAGACCATC CGCCGCACCGCCGAAACACTGCTCAAGAACGCAGGCTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCGC GAATCATATTCGTCGATATCATGATGCCGCGTCTGGACGGTTATCAGACCTGCGCGCTGATCAAGAACAATCGGGCATTCAAGTCGACGCCGGTCATCAT GCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAGC GCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAACACATATCATGACGCCCGCGCCTGATGTCGCGCGCTCGTAATCTGACGGGGAACACCC
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DNA Sequence for Gene |
>P406_RS09360
ATGGCTCGAATATTGATCGTCGATGATTCGCCGACTGAAATGTACAAACTCACCGGCATGCTGGAAAAGCACGGTCATGAAGTGCTCAAGGCCGAAAACG GCGCTGATGGCGTGGCCCTGGCCCGTCAGGAAAAGCCCGATGCCGTGCTGATGGACATCGTCATGCCGGGGCTCAACGGCTTTCAGGCCACGCGCCAGCT GACCAAGGATGCCGACACCAGCATGATCCCGGTGATCATGATCACTACCAAGGATCAGGAGACCGACAAGGTCTGGGGCAAACGCCAGGGCGCGCGGGAT TACCTGACCAAGCCGGTGGACGAAGAAACCCTGATGAAAACCCTGAATGCGGTGCTGGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGCCGGAATCGCCATGGCCGAGCCGCGCACCGCTTTTGAACTGCTTCTGGATATGGATCGACGCTGTCGTTCGCTGGCGGCGGGCCTGCCGCTGCAGGA AGCCCATCAGCAGGACTGGGTCGGCATCGGCTTTCGCATGGGCGAGCAACGCTTTGTCGCGCCGATCGGCGAGATCGCCGAAATCCTTCACGAACCCCAT CATGCGGTAATGCCCGGTGTGAAGTTCTGGGTGGCGGGTATCGCCAATCTGCGCGGTCGGTTGCTGCCACTCATGGATCTGTGCGGGTTTTTCGGCCACG AACTGGCGCCGGTGCGCAAACAGCGCCGGGTGCTGGTGGTCGAGCACCATGACGTATTTGCCGGTCTGCTGGTCGATGAAGTGTTCGGCATGCAACGTTT CAGTCAGTTGAGCCTCATACCCCAGACCCCGCAGGACATGGATCAGCGTATGGTGCCGTTCCTGCGCGGGCAATTTATCCGCGAGCAGGCGTGGCAGATA
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Amino Acid Sequence |
>chemotaxis protein CheY
MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALARQEKPDAVLMDIVMPGLNGFQATRQLTKDADTSMIPVIMITTKDQETDKVWGKRQGARD YLTKPVDEETLMKTLNAVLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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