Pseudomonas syringae pv. coryli NCPPB 4273, P406_RS07230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. coryli str. NCPPB 4273 contig12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGGCTTCACCGGCCTCTTCGCGAGCAAGCTCGCTCCCACGAAGACTTGTGTGTAACGCTGAGCGCGGAGCATGTTGCGGGCACTTATCGTTCCTCACGC ACCGTGGACTGCATTTCGTGACGCTCCGCGTCACAGCTACATGCTGTATCGGGCTGGACAGAAATCTTGGTGGGAGTGAGCTTGCTCACGAAGACTTTGG TCCAAACGCCATATTTCCCGGTGCTGCACCGACCTCTTCGCGAGCAAGCTCGCTCCCACCAAGACTGTGTATTACGCTGAGCGCGGAGCATGGACACGAT GGCGTTCTTAGGGATACCTCTCGTTCCGCACGCTCCAGCGTGGTAATGCATTTGGTAACGCTCTGCGTCACATGGCATTGATAGCCATACGCCACGCGCG CGAGTAATACCGGGTATTTCCGGTGCCTGAACAGCTTCGCGTTGGCGGCAAGCATGGATCGTGGCACGATGGTCCGGTTATCGAACCGGACTTCCTGACC
|
|
| DNA Sequence for Gene |
>P406_RS07230
ATGCCGCACTCAACACCCAAGAATTTTTCACTGATCGCCGCTATCGACCTGGGCTCCAACAGCTTTCATATGGTTGTGGCAAAAGCCAATCAGGGCGAGA TTCGCATTCTTGAGCGCCTGGGCGAGAAGGTGCAGTTGGCCGCTGGCATCGACGAAGAGCGCCAGTTGACCGAAGAATCCATGCAACGCGGTCTCGACTG CCTGAAACGCTTCGCCCAGTTGATCAACGGGCTGCCGCTCGGTGCGGTGCGCATCGTGGGCACCAATGCCCTGCGCGAGGCGCGTAACCGCAACGACTTC ATTCACCGCGCCGAAGAAATCCTCGGCCACCCGGTGGAAGTGATTTCCGGCCGCGAAGAAGCGCGCCTCATTTACCTGGGCGTCTCCCACACGCTGGCCG ACACCCCGGGCAAACGTCTGGTCGCCGATATCGGCGGCGGTAGTACCGAATTCATCATCGGCCAGCGCTTCGAGCCGCTGCTGCGTGAAAGCTTGCAGAT GGGCTGCGTGAGTTTTACCCAGCGCTACTTCCGCGACGGCAAGGTGACACCGGCCCGGTACGCTCAGGCCTATACCGCTGCCCGTCTGGAAATCATGAGC ATCGAACACGCGCTGCATCGCCTCAAGTGGGATGAAGCGATCGGTTCGTCAGGCACCATTCGTGCTATCGGCGTGGCGCTCAAGGCCAATGGTTACGGCG CTGGCGAGGTCAACGCCGAAGGGCTGGCCTGGCTCAAGCGCAAGCTGTTCAAGCTGGGTGACGTGGAAAAGATCGACTTCGACGGCATCAAACCCGACCG TCGCGCCATTTTTCCCGCAGGCCTGGCGATTCTGGAAGCCATCTTCGACGCCCTCGAGCTCAAGCGCATGGATCACTGCGAAGGTGCCCTGCGTGAAGGC GTGTTGTATGACCTGATGGGCCGCCATCATCACGAAGACGTGCGTGAGCGTACGCTCAGCTCGCTGATGGAGCGTTATCACGTCGATCTGGAGCAGGCCG CACGCGTTGAAGCCAAGGCGCTGCATGCGCTGGAGCAGGTTGCCGAGAGTTGGGACCTGCAGCACGAAAGCTACGCCGAACTGCTGAGCTGGGCGGCCAA GGTGCACGAGATCGGCCTGGACATCGCTCACTATCACTACCACAAGCACGGCGCGTACCTGATCGAGCACTCCGACCTTGCCGGTTTCTCACGCGAAGAC CAGCAAATGCTTGCACTGCTGGTGCGCGGTCATCGCCGTAATATTCCCAAGGACAAGTTCGCCGAGTTCGGCGATGAAGGCATCAAGCTGATTCGCCTGT GCGTGCTGTTGCGCTTTGCGATTCTGTTTCACCACATTCGTGGCACCCAGGAGATGCCACGTGTGACGTTGCGTGCCGACGGCCCGAATCTGGACGCCGA ATTCCCGAAAGGCTGGCTGGAAAACAACCAGCTGACTCAGGCCGACTTCGCGCTGGAAGCGGAGTGGCTGACCCGAGTCGGCATCGTCTTCAGCGTACGC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTACCGGGTTGCTCAGGCGCTCCAAAAGAGTCGCCTGGGCGCTTCGCGGGTTCTGATTACCGGTCGGCGTGCTGCGCACGTAACGCCCGTCCGACTGCAA CAGCCAGCTGTGGGTGTTGTCGGTCAGGTAGCTTTCCAGTTCCTTCTTCACACGCAGAATCAACTTCTTGCCTTCCACCGGGAAGCAGGTCTCGACGCGC TTGTCGAGGTTGCGCTCCATCCAGTCGGCACTCGACAGGAACATCTGCTCGTCTCCGCCGTTGAGGAAGTAGAACACTCGCGTGTGCTCCAGGAAGCGGC CGATGATCGAGCGCACATGGATGTTGTGCGAAACCCCGGCGATGCCCGGACGCAGACAGCACATGCCGCGCACCACCAGATCGATGCGCACACCGGACTG GCTGGCCTTGTACAACGCCCGGATGATCTTCGGATCGGTCAGCGAGTTGAACTTGGCGATGATGTGCGCAGGCTTGCCGTCGAGCGCAAATTGCGTCTCG
|
|
| Amino Acid Sequence |
>exopolyphosphatase
MPHSTPKNFSLIAAIDLGSNSFHMVVAKANQGEIRILERLGEKVQLAAGIDEERQLTEESMQRGLDCLKRFAQLINGLPLGAVRIVGTNALREARNRNDF IHRAEEILGHPVEVISGREEARLIYLGVSHTLADTPGKRLVADIGGGSTEFIIGQRFEPLLRESLQMGCVSFTQRYFRDGKVTPARYAQAYTAARLEIMS IEHALHRLKWDEAIGSSGTIRAIGVALKANGYGAGEVNAEGLAWLKRKLFKLGDVEKIDFDGIKPDRRAIFPAGLAILEAIFDALELKRMDHCEGALREG VLYDLMGRHHHEDVRERTLSSLMERYHVDLEQAARVEAKALHALEQVAESWDLQHESYAELLSWAAKVHEIGLDIAHYHYHKHGAYLIEHSDLAGFSRED QQMLALLVRGHRRNIPKDKFAEFGDEGIKLIRLCVLLRFAILFHHIRGTQEMPRVTLRADGPNLDAEFPKGWLENNQLTQADFALEAEWLTRVGIVFSVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|