Pseudomonas syringae pv. tomato NYS-T1, NB04_RS25260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0000155 | phosphorelay sensor kinase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:cd00088
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004673 | protein histidine kinase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0006935 | chemotaxis |
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0007165 | signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0016310 | phosphorylation |
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 626 | 764 | 3.0E-22 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1226 | 1326 | 1.7E-14 |
| Gene3D | G3DSA:3.30.565.10 | - | IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | 1519 | 1705 | 1.2E-50 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1690 | 1703 | 2.0E-10 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 627 | 717 | 4.01691E-8 |
| PANTHER | PTHR43395 | SENSOR HISTIDINE KINASE CHEA | - | - | 3 | 782 | 0.0 |
| CDD | cd17546 | REC_hyHK_CKI1_RcsC-like | - | - | 1868 | 1979 | 3.11752E-32 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1083 | 1173 | 1.5E-14 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 1868 | 1986 | 4.2E-41 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 918 | 1038 | 5.0E-16 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 1868 | 1979 | 1.2E-28 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 1224 | 1344 | 1.18E-25 |
| SUPERFAMILY | SSF50341 | CheW-like | IPR036061 | CheW-like domain superfamily | 1706 | 1837 | 1.24E-24 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 1081 | 1200 | 6.93E-28 |
| FunFam | G3DSA:3.30.565.10:FF:000016 | Chemotaxis protein CheA, putative | - | - | 1521 | 1705 | 3.7E-59 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 7 | 130 | 4.97E-19 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 10 | 99 | 1.8E-7 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 627 | 733 | 5.1E-5 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | - | - | 1777 | 1839 | 4.2E-20 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 917 | 1045 | 7.9E-14 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 777 | 875 | 1.3E-11 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1666 | 1684 | 2.0E-10 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 14 | 129 | 2.0E-8 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 776 | 903 | 2.6E-17 |
| SMART | SM00387 | HKATPase_4 | IPR003594 | Histidine kinase/HSP90-like ATPase | 1565 | 1706 | 9.4E-21 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 627 | 756 | 2.22E-23 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 775 | 863 | 2.85381E-7 |
| Pfam | PF01584 | CheW-like domain | IPR002545 | CheW-like domain | 1711 | 1843 | 6.9E-24 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1224 | 1322 | 3.5063E-13 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 1866 | 1979 | 1.6E-36 |
| PRINTS | PR00344 | Bacterial sensor protein C-terminal signature | IPR004358 | Signal transduction histidine kinase-related protein, C-terminal | 1610 | 1624 | 2.0E-10 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 432 | 557 | 1.71E-14 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | IPR036890 | Histidine kinase/HSP90-like ATPase superfamily | 1522 | 1703 | 8.38E-36 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 1865 | 1983 | 2.99E-37 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 775 | 878 | 0.012 |
| SMART | SM00260 | chew_2 | IPR002545 | CheW-like domain | 1698 | 1841 | 3.5E-24 |
| Coils | Coil | Coil | - | - | 1419 | 1439 | - |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1081 | 1178 | 1.8E-9 |
| CDD | cd00088 | HPT | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1081 | 1179 | 1.52297E-14 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 1223 | 1352 | 1.4E-28 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | IPR003594 | Histidine kinase/HSP90-like ATPase | 1569 | 1704 | 3.9E-13 |
| Gene3D | G3DSA:1.20.120.160 | HPT domain | IPR036641 | HPT domain superfamily | 1076 | 1204 | 1.0E-28 |
| SMART | SM01231 | H_kinase_dim_2 | IPR004105 | Histidine kinase CheA-like, homodimeric domain | 1381 | 1520 | 2.3E-7 |
| SMART | SM00073 | hpt_2 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 1224 | 1321 | 3.5E-11 |
| SUPERFAMILY | SSF47226 | Histidine-containing phosphotransfer domain, HPT domain | IPR036641 | HPT domain superfamily | 775 | 897 | 9.03E-20 |
| Pfam | PF01627 | Hpt domain | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain | 629 | 711 | 1.9E-12 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.