Pseudomonas syringae pv. tomato NYS-T1, NB04_RS21100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGCGCGCCAGGTCTCGTGGGTTTCATCTGGTGACTGACGAGATCGTCGCAGGCTTGCCTCAGTTGCGCGATTGTCGTGTCGGCCTGCTTCACGTATGGC TGCAACATACCTCGGCTTCGTTGACCGTCAACGAAAATGCCGATCCGGCAGTTCGTCGTGACTTCGAGCGTTTTTTCAACCGTCTGGTGCCTCAGGGCGT GGACGACTACGAACATGACGACGAAGGCCCTGATGATTTGCCAGCGCATTTCAAGGCCAGTTTGCTGGGCTGCCAGTTGTTTTTGCCGGTGACGGCAGGC CGACTGGCGCTGGGCACCTGGCAAGGTATTTATCTGGGCGAACATCGAGACGCGGGTGGGTCTCGTAACGTCCTGGCCACCCTTCAGGGTGAGTACGCAT AACCGCTGGAGACAGCGGTTGTTGAATTTTTCCGGTTGCCTTAGCAATTCTGGGCGGCTGGGCTATAACTAATCAGCTTTCGCAAGTCATGAGGTAGAAC
DNA Sequence for Gene
>NB04_RS21100
ATGAGCGACGACGACGATACTAACGACGATCTGGTAGACGACCTGGAAGGCGAAGAGGACGGTGAGGAGCTTGCAGCTGCTTCCCCGGAAGACGACTCGG CCGAACCAGACGATTCCGACGTCCCGGCAGCGCCCGCAAAAGGCAAGGCCAAGGCTGCGGTCTCGGTTGACGAGCTGCCTAGCGTAGAAGCCAAGAACAA AGAGCGTGATGCTCTGGCGCGTGCGATGGAAGAATTCCTGGCGCGTGGCGGCAAGGTGCAGGAAGTGGAGGCCAATGTGGTCGCCGATCCGCCCAAAAAG CCTGACAACAAATACGGCAGCCGCCCGATTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTGGCAGACGCTGTATGAGAAAAAGCCCGCCGTCGCTGCGGGCTTTTTCTATTGTGGGCGTCTCAGGCTGTTTTCAGGCCCAGCGCGCCAGTACTTCCG GCAATTGCGACAGGTTGTGAATCTCGGCATCCGGCAAGCGATCTGCGTCCCAGGCCTTGCCCTGCGGGTTGTACCAAATGGCGCGCATGCCCGCCTGTTG TGCGCCGGCAATGTCGTCGCTGGGGTGGTCGCCGACGTGCACGGCCGCGCTGGCATCGACTTTTGCACGGCGCAGCGCTTCGAGAAACGGGGCCGGGTCG GGCTTGCCGATGCCCAGGTCCTCGGCACACAGGGCAAAGGCAAAGTAGTCGGCCAGCCCCAGGCGACGCACGTCAGCATTGCCGTTGGTGATAACGCCGA GCGTGAAGGTCTTGGCGAGAATTTCCAGAGTGGGCTGCACCTCCGGGAAAATCTGCACCTGATGGCGGCCATGCAGAAAGACTTCAAAGCTCTCGTCGGC
Amino Acid Sequence
>hypothetical protein
MSDDDDTNDDLVDDLEGEEDGEELAAASPEDDSAEPDDSDVPAAPAKGKAKAAVSVDELPSVEAKNKERDALARAMEEFLARGGKVQEVEANVVADPPKK PDNKYGSRPI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site