Pseudomonas syringae pv. tomato NYS-T1, NB04_RS19395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. tomato strain NYS-T1 Contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATTGCTCACGGTCTGTCGGCCGCCGCACTGTTCATCCTCAGCGGCCAGCTCTACGAGCGCCTGCATACCCGTGACATGCGCGAAATGGGCGGCCTGTGG TCACGCATTGCCTACATCCCGGCCATCAGCCTGTTCTTTGCAGCCGCCTCTCTGGGTCTGCCGGGCACCGGCAACTTCGTCGGCGAGTTCCTGATTCTGC TGGGCAGCTTCGCCAGCGCGCCCTGGATCACGGCGATTGCCACCTCCGGTCTGGTGTTCGGTTCTGTCTACTCGCTGATCATGATCCACCGCGCCTACTT CGGCCCGGCAAAGTCCGACGAAGTTCTGAAAGGCATGGACGGACGGGAAATGATCATGGTGCTGGGCCTTGCCGTGTTGCTGGTCGTGTTGGGGGTTTTC CCGCAGCCGTTCCTCGACACTTCGGCAGCGACCATGCACGGCGTGCAGCAATGGCTAGGCACTGCCTTCACTCAACTCGCTTCGGCCCGGTAAGAGCGCT
DNA Sequence for Gene
>NB04_RS19395
ATGGACCTGACGATTCAACACTTTATTGCGCTTGCGCCACTGCTGATTACCAGCCTCACCGTTGTTGTGGTGATGCTGGCGATTGCATGGCGCCGCAATC ACTCGCAAACGTTCCTGCTTTCAGTAGCAGGCCTCAACCTGGCTCTTCTGTCGATTTACCCGGCCCTCAAAGTTGCACCGCTGGTGGTGACACCGCTGCT GCACATCGACAACTTTGCCTGCCTGTACATGGCGATCATTCTGGCCTCGACGCTGGCCTGCGTGACCATGGCGCACGCCTACCTGGGTGATGGCAAGGTT GGCTATCCGGGCAACCGCGAAGAGCTTTATCTGCTGATCCTGCTGGCCGCCGCCGGCGGTCTGGTGCTGGTCAGCGCTCAGCATCTGGCTGGCCTGTTCA TTGGCCTGGAGTTGCTGTCGGTGCCGGTCTACGGGCTGGTGGCTTATGCTTTCTTCAACAAGCGCTCTCTGGAAGGCGGCATCAAGTACATGGTGCTGTC GGCCGCTGGCTCGGCATTTCTGCTGTTCGGCATGGCGTTGTTGTACGCAGAAGCAGGTTCTCTGAGCTTTGAGGGTATCGGCAAGGCCATCGCTGCTACC GGCATGCCAAGCCCGATCGCCACGGTCGGTCTGGGCATGATGGTTGTCGGCCTCGCCTTCAAATTGTCGCTGGTGCCGTTCCACCTGTGGACGCCAGACG TCTACGAAGGCGCCCCTGCTCCGGTCGCAGCGTTCCTGGCCACTGCGAGCAAGGTGGCCGTGTTTGCGGTACTGGTGCGTCTGTTCCAGATTTCTCCGGC GGCCAGCAGTGGTGTATTGCACGACGTGCTGGCGGTGATTGCCGTGGCATCGATTCTGGTCGGCAACCTGCTGGCGCTAACCCAGACCAACCTCAAGCGT CTGCTGGGTTATTCGTCCATTGCACACTTCGGTTACCTGATGATTGCGCTGGTGGCCAGCAAAGGCATGGCAGTCGAGGCGATTGGCGTCTATCTGGCGA CCTACGTGCTGACCTCGCTGGGCAGCTTCGGCGTGATTACCATGATGTCTTCGCCTTACAGCGGACGTGATGCCGATGCGATGTTCGAATACCGCGGGCT GTTCTGGCGTCGTCCGTACCTGACCGCAGTCATGACCCTGATGATGCTGTCGCTGGCCGGTATTCCGCTCACTGCAGGCTTCATCGGCAAGTTCTACATC ATTGCCACCGGCGTTGAATCACAACTGTGGTGGCTGATCGGAGCCCTGGTGATCGGCAGCGCCATTGGCGTCTTCTACTACCTGCGCGTCATGGTCACCA TGTACCTGGTCGACAACAAGTTGCCGCGTCACGACGCAGCGATCAACTGGGCACAGCGCACTGGCGGCGTCATGCTGCTGGCGGTCGCGATCCTCACCTT CGTACTGGGTGTGTATCCACAACCGCTGCTCGATCTGGTGGTCAATGCCGGTCTGCACGCAGCAGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCATCCAGAAACAAAAAACCCTGCCATTGAGCAGGGTTTTTTTGTCTCTGGAAAACTAGCCCGGCAGCTTCACCGGTTTCTTGGCGCCGCTGAACAATCC CCAACTGGAAATGAACAGTGCAGCGATCAGAGGGCCGATCACAAAGCCGTTCAGGCCAAAGACCGACATGCCGCCCAAGGTGGAAATGAGGATCAGATAG TCCGGCATCTTGGTGTCCTTGCCGACCAGAATCGGACGCAGCACGTTATCCACCAGGCCGATCACGAACACCCCGAACAATCCCAGTACCACGCCCTGCC AGATCATGCCGCTGAGCAGGAAGTAAAGAGCCACCGGCGCCCAGACAATCCCTGCACCGACTGCCGGCAACAGGGACAGGAAAGCCATGATCACCGCCCA GAGCAAGGCACTTGGAATATCCAGCGCCCAGAAGATGAAGCCGCCCAGCGCACCTTGCGTCACGGCAACCACTACGTTGCCTTTGACGGTGGCCCGCACC
Amino Acid Sequence
>NADH:ubiquinone oxidoreductase subunit N
MDLTIQHFIALAPLLITSLTVVVVMLAIAWRRNHSQTFLLSVAGLNLALLSIYPALKVAPLVVTPLLHIDNFACLYMAIILASTLACVTMAHAYLGDGKV GYPGNREELYLLILLAAAGGLVLVSAQHLAGLFIGLELLSVPVYGLVAYAFFNKRSLEGGIKYMVLSAAGSAFLLFGMALLYAEAGSLSFEGIGKAIAAT GMPSPIATVGLGMMVVGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVLVRLFQISPAASSGVLHDVLAVIAVASILVGNLLALTQTNLKR LLGYSSIAHFGYLMIALVASKGMAVEAIGVYLATYVLTSLGSFGVITMMSSPYSGRDADAMFEYRGLFWRRPYLTAVMTLMMLSLAGIPLTAGFIGKFYI IATGVESQLWWLIGALVIGSAIGVFYYLRVMVTMYLVDNKLPRHDAAINWAQRTGGVMLLAVAILTFVLGVYPQPLLDLVVNAGLHAAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site